Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 RN7SL518P-201ENST00000491887 280 ntBASIC7.86□□□□□ -1.15
LIG1P18858 AC113420.1-201ENST00000507903 571 ntBASIC7.86□□□□□ -1.15
LIG1P18858 AC011352.2-201ENST00000514574 1016 ntBASIC7.86□□□□□ -1.15
LIG1P18858 SNORA3.4-201ENST00000515969 96 ntBASIC7.86□□□□□ -1.15
LIG1P18858 SCARNA6-201ENST00000515982 265 ntBASIC7.86□□□□□ -1.15
LIG1P18858 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC7.86□□□□□ -1.15
LIG1P18858 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC7.86□□□□□ -1.15
LIG1P18858 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC7.86□□□□□ -1.15
LIG1P18858 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.86□□□□□ -1.15
LIG1P18858 OR4C49P-201ENST00000563891 900 ntBASIC7.86□□□□□ -1.15
LIG1P18858 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC7.86□□□□□ -1.15
LIG1P18858 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.86□□□□□ -1.15
LIG1P18858 COX6CP16-201ENST00000603667 216 ntBASIC7.86□□□□□ -1.15
LIG1P18858 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.86□□□□□ -1.15
LIG1P18858 AL360219.1-201ENST00000610230 366 ntBASIC7.86□□□□□ -1.15
LIG1P18858 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
LIG1P18858 MIR8082-201ENST00000612488 81 ntBASIC7.86□□□□□ -1.15
LIG1P18858 AC022106.1-201ENST00000612834 766 ntBASIC7.86□□□□□ -1.15
LIG1P18858 OR1N1-202ENST00000619659 939 ntBASIC7.86□□□□□ -1.15
LIG1P18858 OR8B1P-202ENST00000641132 1178 ntBASIC7.86□□□□□ -1.15
LIG1P18858 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.86□□□□□ -1.15
LIG1P18858 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
LIG1P18858 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.86□□□□□ -1.15
LIG1P18858 AC009120.2-204ENST00000621548 2032 ntBASIC7.86□□□□□ -1.15
LIG1P18858 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
LIG1P18858 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LIG1P18858 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.86□□□□□ -1.15
LIG1P18858 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.86□□□□□ -1.15
LIG1P18858 CDY11P-201ENST00000447168 1651 ntBASIC7.86□□□□□ -1.15
LIG1P18858 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.86□□□□□ -1.15
LIG1P18858 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
LIG1P18858 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
LIG1P18858 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.85□□□□□ -1.15
LIG1P18858 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LIG1P18858 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LIG1P18858 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.85□□□□□ -1.15
LIG1P18858 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LIG1P18858 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LIG1P18858 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LIG1P18858 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LIG1P18858 AC005618.1-201ENST00000606901 3148 ntBASIC7.85□□□□□ -1.15
LIG1P18858 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LIG1P18858 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LIG1P18858 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.85□□□□□ -1.15
LIG1P18858 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LIG1P18858 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
LIG1P18858 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LIG1P18858 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
LIG1P18858 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
LIG1P18858 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
LIG1P18858 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
LIG1P18858 AL356131.1-201ENST00000405826 414 ntBASIC7.85□□□□□ -1.15
LIG1P18858 AL139100.1-201ENST00000408001 498 ntBASIC7.85□□□□□ -1.15
LIG1P18858 LSM5-206ENST00000409987 504 ntTSL 5 BASIC7.85□□□□□ -1.15
LIG1P18858 RPSAP60-201ENST00000415403 880 ntBASIC7.85□□□□□ -1.15
LIG1P18858 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LIG1P18858 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LIG1P18858 TIMM9P2-201ENST00000419324 266 ntBASIC7.85□□□□□ -1.15
LIG1P18858 ZBTB8OSP2-201ENST00000423890 504 ntBASIC7.85□□□□□ -1.15
LIG1P18858 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
LIG1P18858 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
LIG1P18858 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.85□□□□□ -1.15
LIG1P18858 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
LIG1P18858 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC7.85□□□□□ -1.15
LIG1P18858 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC7.85□□□□□ -1.15
LIG1P18858 AC073387.1-201ENST00000453261 709 ntBASIC7.85□□□□□ -1.15
LIG1P18858 BZW1P1-201ENST00000454901 1240 ntBASIC7.85□□□□□ -1.15
LIG1P18858 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
LIG1P18858 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC7.85□□□□□ -1.15
LIG1P18858 RPL21P42-201ENST00000488408 464 ntBASIC7.85□□□□□ -1.15
LIG1P18858 RN7SL561P-201ENST00000488553 281 ntBASIC7.85□□□□□ -1.15
LIG1P18858 RPL10P7-201ENST00000495649 625 ntBASIC7.85□□□□□ -1.15
LIG1P18858 AK6-203ENST00000502819 743 ntTSL 5 BASIC7.85□□□□□ -1.15
LIG1P18858 AC021220.1-201ENST00000507445 630 ntBASIC7.85□□□□□ -1.15
LIG1P18858 AC008868.1-201ENST00000509786 737 ntBASIC7.85□□□□□ -1.15
LIG1P18858 CFI-204ENST00000510800 667 ntTSL 2 BASIC7.85□□□□□ -1.15
LIG1P18858 RNA5SP96-201ENST00000516041 107 ntBASIC7.85□□□□□ -1.15
LIG1P18858 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC7.85□□□□□ -1.15
LIG1P18858 OR4A17P-201ENST00000526032 904 ntBASIC7.85□□□□□ -1.15
LIG1P18858 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC7.85□□□□□ -1.15
LIG1P18858 RFPL1S-203ENST00000539579 330 ntBASIC7.85□□□□□ -1.15
LIG1P18858 AC092375.1-201ENST00000550410 637 ntBASIC7.85□□□□□ -1.15
LIG1P18858 AC024909.2-201ENST00000553035 286 ntBASIC7.85□□□□□ -1.15
LIG1P18858 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.85□□□□□ -1.15
LIG1P18858 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC7.85□□□□□ -1.15
LIG1P18858 PPIAP14-201ENST00000577627 496 ntBASIC7.85□□□□□ -1.15
LIG1P18858 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC7.85□□□□□ -1.15
LIG1P18858 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LIG1P18858 PRR13P5-201ENST00000596581 442 ntBASIC7.85□□□□□ -1.15
LIG1P18858 DEFB131E-202ENST00000602581 683 ntBASIC7.85□□□□□ -1.15
LIG1P18858 AL512430.4-201ENST00000603085 613 ntBASIC7.85□□□□□ -1.15
LIG1P18858 AC092960.1-201ENST00000604762 351 ntBASIC7.85□□□□□ -1.15
LIG1P18858 AC073387.2-201ENST00000604797 784 ntBASIC7.85□□□□□ -1.15
LIG1P18858 AC015849.2-201ENST00000605738 409 ntBASIC7.85□□□□□ -1.15
LIG1P18858 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC7.85□□□□□ -1.15
LIG1P18858 AC096586.2-201ENST00000610260 441 ntBASIC7.85□□□□□ -1.15
LIG1P18858 AL121782.1-201ENST00000611242 413 ntBASIC7.85□□□□□ -1.15
LIG1P18858 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
LIG1P18858 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.85□□□□□ -1.15
LIG1P18858 AC243725.1-201ENST00000637164 436 ntBASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms