Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
TOP2AP11388 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
TOP2AP11388 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
TOP2AP11388 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
TOP2AP11388 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
TOP2AP11388 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
TOP2AP11388 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
TOP2AP11388 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
TOP2AP11388 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
TOP2AP11388 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC10.08□□□□□ -0.8
TOP2AP11388 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
TOP2AP11388 AL109941.1-201ENST00000401925 229 ntBASIC10.07□□□□□ -0.8
TOP2AP11388 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC10.07□□□□□ -0.8
TOP2AP11388 NIPA2P1-201ENST00000426223 976 ntBASIC10.07□□□□□ -0.8
TOP2AP11388 RN7SL860P-201ENST00000473738 223 ntBASIC10.07□□□□□ -0.8
TOP2AP11388 AC024451.1-201ENST00000508013 779 ntBASIC10.07□□□□□ -0.8
TOP2AP11388 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC10.07□□□□□ -0.8
TOP2AP11388 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
TOP2AP11388 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
TOP2AP11388 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
TOP2AP11388 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
TOP2AP11388 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
TOP2AP11388 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
TOP2AP11388 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC10.07□□□□□ -0.8
TOP2AP11388 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC10.07□□□□□ -0.8
TOP2AP11388 AC112243.1-201ENST00000623949 3851 ntBASIC10.07□□□□□ -0.8
TOP2AP11388 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
TOP2AP11388 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
TOP2AP11388 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC10.07□□□□□ -0.8
TOP2AP11388 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC10.07□□□□□ -0.8
TOP2AP11388 AL121768.1-201ENST00000613917 2544 ntBASIC10.07□□□□□ -0.8
TOP2AP11388 ZNF658B-201ENST00000602828 3408 ntBASIC10.07□□□□□ -0.8
TOP2AP11388 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
TOP2AP11388 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
TOP2AP11388 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
TOP2AP11388 POT1-202ENST00000393329 3950 ntTSL 5 BASIC10.07□□□□□ -0.8
TOP2AP11388 RNU1-77P-201ENST00000390868 162 ntBASIC10.07□□□□□ -0.8
TOP2AP11388 RN7SKP151-201ENST00000410230 316 ntBASIC10.07□□□□□ -0.8
TOP2AP11388 AL390774.1-201ENST00000411924 246 ntBASIC10.07□□□□□ -0.8
TOP2AP11388 AC007562.1-201ENST00000421819 517 ntBASIC10.07□□□□□ -0.8
TOP2AP11388 AC092106.1-201ENST00000444291 373 ntBASIC10.07□□□□□ -0.8
TOP2AP11388 AC023274.2-201ENST00000445264 521 ntBASIC10.07□□□□□ -0.8
TOP2AP11388 RPL7AP6-201ENST00000477943 801 ntBASIC10.07□□□□□ -0.8
TOP2AP11388 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC10.07□□□□□ -0.8
TOP2AP11388 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC10.07□□□□□ -0.8
TOP2AP11388 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC10.07□□□□□ -0.8
TOP2AP11388 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC10.07□□□□□ -0.8
TOP2AP11388 MIR4311-201ENST00000580794 100 ntBASIC10.07□□□□□ -0.8
TOP2AP11388 RN7SL708P-201ENST00000580952 299 ntBASIC10.07□□□□□ -0.8
TOP2AP11388 AC010245.2-201ENST00000606908 1167 ntBASIC10.07□□□□□ -0.8
TOP2AP11388 AC126915.2-201ENST00000610957 190 ntBASIC10.07□□□□□ -0.8
TOP2AP11388 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC10.07□□□□□ -0.8
TOP2AP11388 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
TOP2AP11388 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
TOP2AP11388 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
TOP2AP11388 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
TOP2AP11388 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
TOP2AP11388 AL031651.1-201ENST00000615357 1438 ntBASIC10.06□□□□□ -0.8
TOP2AP11388 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
TOP2AP11388 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
TOP2AP11388 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
TOP2AP11388 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
TOP2AP11388 RN7SKP216-201ENST00000411050 312 ntBASIC10.06□□□□□ -0.8
TOP2AP11388 SLC35E1P1-201ENST00000419313 864 ntBASIC10.06□□□□□ -0.8
TOP2AP11388 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC10.06□□□□□ -0.8
TOP2AP11388 RPL12P3-201ENST00000440080 396 ntBASIC10.06□□□□□ -0.8
TOP2AP11388 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC10.06□□□□□ -0.8
TOP2AP11388 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC10.06□□□□□ -0.8
TOP2AP11388 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC10.06□□□□□ -0.8
TOP2AP11388 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC10.06□□□□□ -0.8
TOP2AP11388 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC10.06□□□□□ -0.8
TOP2AP11388 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC10.06□□□□□ -0.8
TOP2AP11388 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
TOP2AP11388 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC10.06□□□□□ -0.8
TOP2AP11388 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
TOP2AP11388 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
TOP2AP11388 AP003119.3-201ENST00000566747 4192 ntBASIC10.05□□□□□ -0.8
TOP2AP11388 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
TOP2AP11388 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC10.05□□□□□ -0.8
TOP2AP11388 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
TOP2AP11388 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
TOP2AP11388 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
TOP2AP11388 RNA5SP319-201ENST00000362768 119 ntBASIC10.05□□□□□ -0.8
TOP2AP11388 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC10.05□□□□□ -0.8
TOP2AP11388 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
TOP2AP11388 RPS27P18-201ENST00000431701 247 ntBASIC10.05□□□□□ -0.8
TOP2AP11388 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC10.05□□□□□ -0.8
TOP2AP11388 AC079841.1-201ENST00000481228 950 ntBASIC10.05□□□□□ -0.8
TOP2AP11388 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC10.05□□□□□ -0.8
TOP2AP11388 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC10.05□□□□□ -0.8
TOP2AP11388 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
TOP2AP11388 IARS-213ENST00000627121 4587 ntTSL 5 BASIC10.05□□□□□ -0.8
TOP2AP11388 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
TOP2AP11388 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
TOP2AP11388 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
TOP2AP11388 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
TOP2AP11388 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
TOP2AP11388 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
TOP2AP11388 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
TOP2AP11388 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms