Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ANKRD54P1-201ENST00000433115 471 ntBASIC2.51□□□□□ -2.01
USH2AO75445 AC245047.5-201ENST00000437312 556 ntBASIC2.51□□□□□ -2.01
USH2AO75445 PRSS3P4-201ENST00000453323 162 ntBASIC2.51□□□□□ -2.01
USH2AO75445 AL035690.1-201ENST00000490892 383 ntBASIC2.51□□□□□ -2.01
USH2AO75445 AC112225.1-201ENST00000508230 297 ntBASIC2.51□□□□□ -2.01
USH2AO75445 ANKS1B-205ENST00000546568 1281 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC2.51□□□□□ -2.01
USH2AO75445 AC024255.1-201ENST00000614376 102 ntBASIC2.51□□□□□ -2.01
USH2AO75445 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 AL138889.1-203ENST00000530000 6593 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC2.51□□□□□ -2.01
USH2AO75445 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
USH2AO75445 COL4A6-208ENST00000538570 6528 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC2.51□□□□□ -2.01
USH2AO75445 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 RNA5SP478-201ENST00000364657 115 ntBASIC2.51□□□□□ -2.01
USH2AO75445 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
USH2AO75445 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC2.51□□□□□ -2.01
USH2AO75445 AC009480.2-201ENST00000422916 432 ntBASIC2.51□□□□□ -2.01
USH2AO75445 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC2.51□□□□□ -2.01
USH2AO75445 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.51□□□□□ -2.01
USH2AO75445 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC2.51□□□□□ -2.01
USH2AO75445 AL358232.1-201ENST00000448030 501 ntBASIC2.51□□□□□ -2.01
USH2AO75445 RPL7AP52-201ENST00000458096 790 ntBASIC2.51□□□□□ -2.01
USH2AO75445 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
USH2AO75445 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
USH2AO75445 ABCA11P-202ENST00000504019 2110 ntBASIC2.51□□□□□ -2.01
USH2AO75445 RNA5SP143-201ENST00000516936 115 ntBASIC2.51□□□□□ -2.01
USH2AO75445 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC2.51□□□□□ -2.01
USH2AO75445 MIR3200-201ENST00000580767 85 ntBASIC2.51□□□□□ -2.01
USH2AO75445 AC006130.2-201ENST00000586202 326 ntBASIC2.51□□□□□ -2.01
USH2AO75445 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC2.51□□□□□ -2.01
USH2AO75445 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC2.51□□□□□ -2.01
USH2AO75445 AC012616.1-201ENST00000600294 197 ntBASIC2.51□□□□□ -2.01
USH2AO75445 HIRAP1-201ENST00000605318 787 ntBASIC2.51□□□□□ -2.01
USH2AO75445 AL139041.1-201ENST00000605480 610 ntBASIC2.51□□□□□ -2.01
USH2AO75445 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.51□□□□□ -2.01
USH2AO75445 WBP1LP8-201ENST00000617401 327 ntBASIC2.51□□□□□ -2.01
USH2AO75445 AC091905.4-201ENST00000623432 202 ntBASIC2.51□□□□□ -2.01
USH2AO75445 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
USH2AO75445 PAX6-231ENST00000606377 6901 ntAPPRIS P4 TSL 5 BASIC2.51□□□□□ -2.01
USH2AO75445 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 AC105749.1-201ENST00000631338 2008 ntBASIC2.51□□□□□ -2.01
USH2AO75445 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC2.51□□□□□ -2.01
USH2AO75445 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC2.51□□□□□ -2.01
USH2AO75445 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC2.51□□□□□ -2.01
USH2AO75445 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC2.51□□□□□ -2.01
USH2AO75445 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 MTAP-201ENST00000380172 6122 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 RNU4-39P-201ENST00000362455 127 ntBASIC2.51□□□□□ -2.01
USH2AO75445 CEACAMP8-201ENST00000413902 580 ntBASIC2.51□□□□□ -2.01
USH2AO75445 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC2.51□□□□□ -2.01
USH2AO75445 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC2.51□□□□□ -2.01
USH2AO75445 AC092647.2-201ENST00000452998 253 ntBASIC2.51□□□□□ -2.01
USH2AO75445 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC2.51□□□□□ -2.01
USH2AO75445 SCARNA9-201ENST00000530422 353 ntBASIC2.51□□□□□ -2.01
USH2AO75445 BLZF2P-201ENST00000553776 1130 ntBASIC2.51□□□□□ -2.01
USH2AO75445 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC2.51□□□□□ -2.01
USH2AO75445 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC2.51□□□□□ -2.01
USH2AO75445 AL627230.1-201ENST00000613077 211 ntBASIC2.51□□□□□ -2.01
USH2AO75445 MIR6716-201ENST00000613413 80 ntBASIC2.51□□□□□ -2.01
USH2AO75445 AL591926.8-201ENST00000616876 211 ntBASIC2.51□□□□□ -2.01
USH2AO75445 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
USH2AO75445 POGK-202ENST00000367876 5754 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC2.51□□□□□ -2.01
USH2AO75445 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC2.51□□□□□ -2.01
USH2AO75445 AC114947.2-201ENST00000565748 2125 ntBASIC2.51□□□□□ -2.01
USH2AO75445 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 SORBS2-209ENST00000418609 5529 ntTSL 2 BASIC2.51□□□□□ -2.01
USH2AO75445 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC2.51□□□□□ -2.01
USH2AO75445 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC2.51□□□□□ -2.01
USH2AO75445 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 ZNF608-201ENST00000306315 5958 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 MDC1-201ENST00000376406 7576 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
USH2AO75445 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 AC079741.1-201ENST00000321498 212 ntBASIC2.51□□□□□ -2.01
USH2AO75445 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC2.51□□□□□ -2.01
USH2AO75445 MIR130A-201ENST00000385274 89 ntBASIC2.51□□□□□ -2.01
USH2AO75445 RPL10P10-201ENST00000403509 664 ntBASIC2.51□□□□□ -2.01
USH2AO75445 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
USH2AO75445 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.51□□□□□ -2.01
USH2AO75445 RPS3AP38-201ENST00000435889 763 ntBASIC2.51□□□□□ -2.01
USH2AO75445 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC2.51□□□□□ -2.01
USH2AO75445 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms