Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
PCDHGA11Q9Y5H2 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
PCDHGA11Q9Y5H2 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC7.65□□□□□ -1.19
PCDHGA11Q9Y5H2 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC7.65□□□□□ -1.19
PCDHGA11Q9Y5H2 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 AC138627.1-203ENST00000641872 1680 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 CEP57L1-202ENST00000368968 1649 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 DCAF13P3-201ENST00000561147 1334 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 MGP-201ENST00000228938 694 ntTSL 3 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 RNU1-11P-201ENST00000383975 164 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 AL355375.1-201ENST00000405686 392 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 AL590002.1-201ENST00000406554 418 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 FCF1P10-201ENST00000407590 479 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 AL590806.1-201ENST00000415818 853 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 AC092647.1-201ENST00000420654 287 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 ARL5AP2-201ENST00000444698 533 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 FDX1P2-201ENST00000450769 375 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 RPL30P9-201ENST00000465586 330 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 RN7SL862P-201ENST00000491550 298 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 RN7SL792P-201ENST00000496286 305 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 AC010342.1-201ENST00000514047 877 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 SNORA20.3-201ENST00000516880 132 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 IGHV7-40-201ENST00000520963 296 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 SDHCP4-201ENST00000532834 510 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 AP002383.5-201ENST00000542623 1161 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 AC009997.1-201ENST00000557862 129 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 AC008392.1-201ENST00000600941 437 ntTSL 2 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 AC125494.2-201ENST00000602431 657 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 AC092681.3-201ENST00000609463 678 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 AC243772.3-202ENST00000609662 1148 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 AP000894.4-201ENST00000610185 483 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 MESTIT1_2.1-201ENST00000616328 235 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 AC099811.5-201ENST00000617211 819 ntTSL 5 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 AC243654.1-201ENST00000620218 293 ntTSL 2 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 AL139089.1-201ENST00000620372 975 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 AC016930.1-201ENST00000468766 2205 ntBASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 RHOXF1-AS1-201ENST00000553843 2102 ntTSL 2 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC7.64□□□□□ -1.19
PCDHGA11Q9Y5H2 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 PHACTR2P1-201ENST00000605639 1414 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AC092111.2-201ENST00000611627 1414 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 CBX3P1-201ENST00000325243 554 ntBASIC7.63□□□□□ -1.19
PCDHGA11Q9Y5H2 RPL21P132-201ENST00000331267 462 ntBASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms