Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 BMS1P10-201ENST00000443754 1120 ntBASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 SDC4P-201ENST00000453285 601 ntBASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 AC067773.1-201ENST00000603284 1094 ntBASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 FO681491.1-202ENST00000623392 737 ntBASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 AC129778.1-202ENST00000623812 261 ntBASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 AL591379.1-207ENST00000635982 261 ntBASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 AF287957.1-201ENST00000607368 1595 ntBASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 AL121768.1-201ENST00000613917 2544 ntBASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 AC092724.1-201ENST00000624623 3397 ntBASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 AL360271.1-201ENST00000395679 510 ntBASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 MYL6P5-201ENST00000412707 459 ntBASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 TRGV5P-201ENST00000419915 354 ntBASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 BX284632.2-201ENST00000421091 399 ntBASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 AL512605.1-202ENST00000441919 381 ntBASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 RPS10P18-201ENST00000442662 495 ntBASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 AL359955.2-201ENST00000445380 353 ntBASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 CCDC11P1-201ENST00000503137 1162 ntBASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 OR5H7P-201ENST00000514084 930 ntBASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 Y_RNA.667-201ENST00000516212 107 ntBASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 NDUFA5P11-201ENST00000567995 343 ntBASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 AL138895.2-201ENST00000603019 178 ntBASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 AL365181.4-201ENST00000609800 547 ntBASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 ZNF658B-201ENST00000602828 3408 ntBASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ECHDC3Q96DC8 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
ECHDC3Q96DC8 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 AC137056.2-201ENST00000624055 1958 ntBASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 SELENOWP1-201ENST00000322792 252 ntBASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 RNU1-150P-201ENST00000362491 162 ntBASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 RN7SKP77-201ENST00000363261 353 ntBASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 RNA5SP514-201ENST00000363717 111 ntBASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 MIR1282-201ENST00000408865 101 ntBASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 AL731534.1-201ENST00000434711 269 ntBASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 AL445928.1-201ENST00000435545 222 ntBASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 RPS7P3-201ENST00000443360 580 ntBASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 AL162739.1-201ENST00000450606 307 ntBASIC6.02□□□□□ -1.45
ECHDC3Q96DC8 AC104164.1-201ENST00000460282 590 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms