Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 AC074375.1-201ENST00000372993 192 ntBASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 SNORA70.6-201ENST00000383934 134 ntBASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 FDPSP5-201ENST00000399474 1057 ntBASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 HIST1H2BPS2-201ENST00000402707 340 ntBASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 RN7SKP286-201ENST00000410894 299 ntBASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 RN7SKP268-201ENST00000411107 316 ntBASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 AC096644.3-201ENST00000416788 338 ntBASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 HYALP1-201ENST00000417674 1279 ntBASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 AL355490.2-201ENST00000422848 548 ntTSL 3 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 KCNQ5-AS1-201ENST00000429832 1101 ntTSL 5 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 ST13P2-201ENST00000438916 1109 ntBASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 RSL24D1P2-201ENST00000445584 366 ntBASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 RPL7AP71-201ENST00000451120 739 ntBASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 AC016687.1-201ENST00000482574 353 ntBASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 RN7SL37P-201ENST00000490461 307 ntBASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 HNRNPCP8-201ENST00000528764 888 ntBASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 FRG2IP-201ENST00000563581 781 ntBASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 AL133406.3-201ENST00000606817 541 ntBASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 AC020658.4-201ENST00000613987 684 ntBASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 SAMMSON-227ENST00000642114 1199 ntBASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 CASC19-248ENST00000641674 1356 ntBASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.49□□□□□ -1.53
CROCCP3Q8IVE0 PSMC1P4-201ENST00000515236 1327 ntBASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 RBPJP6-201ENST00000411556 1431 ntBASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 AC005261.2-201ENST00000593427 4258 ntBASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 AP001541.1-201ENST00000623322 1904 ntBASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 THAP12P5-201ENST00000405864 2275 ntBASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 SNORD16-201ENST00000362803 99 ntBASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 RNU6-1331P-201ENST00000363658 106 ntBASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 RN7SKP97-201ENST00000410966 333 ntBASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 AL050402.1-201ENST00000440477 770 ntTSL 3 BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 GAPDHP33-201ENST00000443168 1013 ntBASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 UBBP5-201ENST00000446970 266 ntBASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 MED28P7-201ENST00000456611 530 ntBASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 ANK3-213ENST00000486349 493 ntTSL 2 BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 SNORA48.9-201ENST00000516419 162 ntBASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 OR7E1P-201ENST00000533891 958 ntBASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 AL390726.5-202ENST00000564800 256 ntBASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 AC090826.1-203ENST00000569235 490 ntBASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 BOLA2P1-201ENST00000584794 232 ntBASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 AC019257.2-201ENST00000605539 497 ntBASIC5.48□□□□□ -1.53
CROCCP3Q8IVE0 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms