Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
PTCH1Q13635 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PTCH1Q13635 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PTCH1Q13635 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PTCH1Q13635 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
PTCH1Q13635 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PTCH1Q13635 AL591848.4-201ENST00000567832 3472 ntBASIC8.25□□□□□ -1.09
PTCH1Q13635 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC8.25□□□□□ -1.09
PTCH1Q13635 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC8.25□□□□□ -1.09
PTCH1Q13635 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PTCH1Q13635 AC009784.1-201ENST00000426484 460 ntBASIC8.25□□□□□ -1.09
PTCH1Q13635 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC8.25□□□□□ -1.09
PTCH1Q13635 AL645937.3-201ENST00000453647 936 ntBASIC8.25□□□□□ -1.09
PTCH1Q13635 OARD1-211ENST00000480585 829 ntTSL 3 BASIC8.25□□□□□ -1.09
PTCH1Q13635 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC8.25□□□□□ -1.09
PTCH1Q13635 OR4A42P-201ENST00000531397 938 ntBASIC8.25□□□□□ -1.09
PTCH1Q13635 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC8.25□□□□□ -1.09
PTCH1Q13635 MIR8080-201ENST00000622224 89 ntBASIC8.25□□□□□ -1.09
PTCH1Q13635 AC073342.3-201ENST00000624211 193 ntBASIC8.25□□□□□ -1.09
PTCH1Q13635 CASC22-202ENST00000628396 802 ntTSL 5 BASIC8.25□□□□□ -1.09
PTCH1Q13635 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PTCH1Q13635 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PTCH1Q13635 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PTCH1Q13635 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PTCH1Q13635 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PTCH1Q13635 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
PTCH1Q13635 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
PTCH1Q13635 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
PTCH1Q13635 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
PTCH1Q13635 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
PTCH1Q13635 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PTCH1Q13635 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
PTCH1Q13635 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC8.25□□□□□ -1.09
PTCH1Q13635 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PTCH1Q13635 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
PTCH1Q13635 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC8.24□□□□□ -1.09
PTCH1Q13635 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC8.24□□□□□ -1.09
PTCH1Q13635 AC104162.1-201ENST00000430831 2382 ntBASIC8.24□□□□□ -1.09
PTCH1Q13635 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC8.24□□□□□ -1.09
PTCH1Q13635 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
PTCH1Q13635 FAM32BP-201ENST00000344033 333 ntBASIC8.24□□□□□ -1.09
PTCH1Q13635 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
PTCH1Q13635 RNA5SP507-201ENST00000363603 121 ntBASIC8.24□□□□□ -1.09
PTCH1Q13635 TPT1-204ENST00000379060 764 ntTSL 5 BASIC8.24□□□□□ -1.09
PTCH1Q13635 FABP12P1-201ENST00000401911 322 ntBASIC8.24□□□□□ -1.09
PTCH1Q13635 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC8.24□□□□□ -1.09
PTCH1Q13635 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC8.24□□□□□ -1.09
PTCH1Q13635 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC8.24□□□□□ -1.09
PTCH1Q13635 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC8.24□□□□□ -1.09
PTCH1Q13635 RPL12P3-201ENST00000440080 396 ntBASIC8.24□□□□□ -1.09
PTCH1Q13635 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC8.24□□□□□ -1.09
PTCH1Q13635 AL022237.1-201ENST00000446663 358 ntBASIC8.24□□□□□ -1.09
PTCH1Q13635 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
PTCH1Q13635 AC100832.1-201ENST00000471945 383 ntBASIC8.24□□□□□ -1.09
PTCH1Q13635 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC8.24□□□□□ -1.09
PTCH1Q13635 AC008953.1-201ENST00000497334 318 ntBASIC8.24□□□□□ -1.09
PTCH1Q13635 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC8.24□□□□□ -1.09
PTCH1Q13635 DCN-210ENST00000547568 823 ntTSL 3 BASIC8.24□□□□□ -1.09
PTCH1Q13635 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC8.24□□□□□ -1.09
PTCH1Q13635 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC8.24□□□□□ -1.09
PTCH1Q13635 AC096996.1-201ENST00000563813 325 ntBASIC8.24□□□□□ -1.09
PTCH1Q13635 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC8.24□□□□□ -1.09
PTCH1Q13635 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC8.24□□□□□ -1.09
PTCH1Q13635 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC8.24□□□□□ -1.09
PTCH1Q13635 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC8.24□□□□□ -1.09
PTCH1Q13635 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
PTCH1Q13635 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
PTCH1Q13635 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PTCH1Q13635 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
PTCH1Q13635 EEF1A1P14-201ENST00000421195 1376 ntBASIC8.24□□□□□ -1.09
PTCH1Q13635 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC8.24□□□□□ -1.09
PTCH1Q13635 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC8.24□□□□□ -1.09
PTCH1Q13635 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
PTCH1Q13635 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC8.24□□□□□ -1.09
PTCH1Q13635 AC025470.1-201ENST00000510053 2032 ntBASIC8.24□□□□□ -1.09
PTCH1Q13635 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
PTCH1Q13635 SPATA31C1-201ENST00000420021 3895 ntBASIC8.23□□□□□ -1.09
PTCH1Q13635 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
PTCH1Q13635 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
PTCH1Q13635 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PTCH1Q13635 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
PTCH1Q13635 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
PTCH1Q13635 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC8.23□□□□□ -1.09
PTCH1Q13635 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC8.23□□□□□ -1.09
PTCH1Q13635 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PTCH1Q13635 RPS12P17-201ENST00000438591 377 ntBASIC8.23□□□□□ -1.09
PTCH1Q13635 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC8.23□□□□□ -1.09
PTCH1Q13635 CT45A11P-201ENST00000448043 1134 ntBASIC8.23□□□□□ -1.09
PTCH1Q13635 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC8.23□□□□□ -1.09
PTCH1Q13635 FTH1P2-201ENST00000466086 412 ntBASIC8.23□□□□□ -1.09
PTCH1Q13635 AC115223.1-201ENST00000466377 870 ntBASIC8.23□□□□□ -1.09
PTCH1Q13635 EIF1P7-201ENST00000487533 337 ntBASIC8.23□□□□□ -1.09
PTCH1Q13635 AC009120.1-201ENST00000493458 473 ntBASIC8.23□□□□□ -1.09
PTCH1Q13635 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC8.23□□□□□ -1.09
PTCH1Q13635 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC8.23□□□□□ -1.09
PTCH1Q13635 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC8.23□□□□□ -1.09
PTCH1Q13635 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC8.23□□□□□ -1.09
PTCH1Q13635 FKBP1AP1-201ENST00000594588 318 ntBASIC8.23□□□□□ -1.09
PTCH1Q13635 RPSAP73-201ENST00000614820 330 ntBASIC8.23□□□□□ -1.09
PTCH1Q13635 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms