Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC091059.2-201ENST00000623355 614 ntBASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC138965.3-201ENST00000623875 498 ntBASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC011416.1-201ENST00000514947 1732 ntBASIC4.68□□□□□ -1.66
HIST1H1AQ02539 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AL136984.1-201ENST00000607611 1893 ntBASIC4.68□□□□□ -1.66
HIST1H1AQ02539 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 RNA5SP279-201ENST00000365513 117 ntBASIC4.67□□□□□ -1.66
HIST1H1AQ02539 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 SNORD94-201ENST00000386037 137 ntBASIC4.67□□□□□ -1.66
HIST1H1AQ02539 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 AC112187.1-201ENST00000455837 479 ntBASIC4.67□□□□□ -1.66
HIST1H1AQ02539 AC063955.1-201ENST00000462872 685 ntBASIC4.67□□□□□ -1.66
HIST1H1AQ02539 RN7SL83P-201ENST00000468131 297 ntBASIC4.67□□□□□ -1.66
HIST1H1AQ02539 RN7SL369P-201ENST00000477138 299 ntBASIC4.67□□□□□ -1.66
HIST1H1AQ02539 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 IGHV4-55-201ENST00000520889 368 ntBASIC4.67□□□□□ -1.66
HIST1H1AQ02539 OR6M2P-201ENST00000529831 871 ntBASIC4.67□□□□□ -1.66
HIST1H1AQ02539 OLR1-210ENST00000544577 924 ntTSL 5 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 AC027229.1-201ENST00000583887 253 ntBASIC4.67□□□□□ -1.66
HIST1H1AQ02539 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 AC004890.3-201ENST00000605566 1095 ntBASIC4.67□□□□□ -1.66
HIST1H1AQ02539 MIR6883-201ENST00000614952 78 ntBASIC4.67□□□□□ -1.66
HIST1H1AQ02539 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 AC007342.5-201ENST00000571340 2142 ntBASIC4.67□□□□□ -1.66
HIST1H1AQ02539 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC4.67□□□□□ -1.66
HIST1H1AQ02539 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 HDAC1P2-201ENST00000453661 1398 ntBASIC4.66□□□□□ -1.66
HIST1H1AQ02539 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 EI24P3-201ENST00000399046 1062 ntBASIC4.66□□□□□ -1.66
HIST1H1AQ02539 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 UBTFL2-201ENST00000411859 1191 ntBASIC4.66□□□□□ -1.66
HIST1H1AQ02539 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 RPS27AP6-201ENST00000427962 448 ntBASIC4.66□□□□□ -1.66
HIST1H1AQ02539 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 WDR82P2-201ENST00000444540 928 ntBASIC4.66□□□□□ -1.66
HIST1H1AQ02539 COX4I1P2-201ENST00000447446 547 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms