Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.4□□□□□ -1.38
PTPN9P43378 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
PTPN9P43378 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
PTPN9P43378 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.4□□□□□ -1.39
PTPN9P43378 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PTPN9P43378 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PTPN9P43378 AC022325.1-201ENST00000502748 2199 ntBASIC6.4□□□□□ -1.39
PTPN9P43378 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PTPN9P43378 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.4□□□□□ -1.39
PTPN9P43378 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN9P43378 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN9P43378 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN9P43378 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.39□□□□□ -1.39
PTPN9P43378 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN9P43378 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN9P43378 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN9P43378 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.39□□□□□ -1.39
PTPN9P43378 SNORA21-201ENST00000362423 132 ntBASIC6.39□□□□□ -1.39
PTPN9P43378 RNU6-891P-201ENST00000384280 111 ntBASIC6.39□□□□□ -1.39
PTPN9P43378 AL139158.1-201ENST00000424719 340 ntBASIC6.39□□□□□ -1.39
PTPN9P43378 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.39□□□□□ -1.39
PTPN9P43378 AC108479.1-201ENST00000431142 427 ntBASIC6.39□□□□□ -1.39
PTPN9P43378 PSMD10P2-201ENST00000432890 672 ntBASIC6.39□□□□□ -1.39
PTPN9P43378 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.39□□□□□ -1.39
PTPN9P43378 AC010240.2-201ENST00000445363 1205 ntBASIC6.39□□□□□ -1.39
PTPN9P43378 AL500527.1-201ENST00000448532 255 ntBASIC6.39□□□□□ -1.39
PTPN9P43378 AC002553.3-201ENST00000453002 341 ntBASIC6.39□□□□□ -1.39
PTPN9P43378 AL355032.1-201ENST00000472981 438 ntBASIC6.39□□□□□ -1.39
PTPN9P43378 AC025181.1-201ENST00000477507 416 ntBASIC6.39□□□□□ -1.39
PTPN9P43378 AC108103.1-201ENST00000511286 446 ntBASIC6.39□□□□□ -1.39
PTPN9P43378 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.39□□□□□ -1.39
PTPN9P43378 AP001804.1-201ENST00000526868 919 ntBASIC6.39□□□□□ -1.39
PTPN9P43378 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.39□□□□□ -1.39
PTPN9P43378 OR1E3-201ENST00000575608 948 ntBASIC6.39□□□□□ -1.39
PTPN9P43378 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PTPN9P43378 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.39□□□□□ -1.39
PTPN9P43378 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN9P43378 AL023583.1-201ENST00000607518 1143 ntBASIC6.39□□□□□ -1.39
PTPN9P43378 AC073575.2-201ENST00000614212 627 ntBASIC6.39□□□□□ -1.39
PTPN9P43378 AC003001.2-201ENST00000616294 831 ntBASIC6.39□□□□□ -1.39
PTPN9P43378 AC048341.3-201ENST00000619323 491 ntBASIC6.39□□□□□ -1.39
PTPN9P43378 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.39□□□□□ -1.39
PTPN9P43378 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN9P43378 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.39□□□□□ -1.39
PTPN9P43378 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN9P43378 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN9P43378 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.39□□□□□ -1.39
PTPN9P43378 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN9P43378 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.39□□□□□ -1.39
PTPN9P43378 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN9P43378 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN9P43378 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
PTPN9P43378 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
PTPN9P43378 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PTPN9P43378 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
PTPN9P43378 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PTPN9P43378 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.38□□□□□ -1.39
PTPN9P43378 THAP12P8-201ENST00000447914 2115 ntBASIC6.38□□□□□ -1.39
PTPN9P43378 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
PTPN9P43378 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.38□□□□□ -1.39
PTPN9P43378 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
PTPN9P43378 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTPN9P43378 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PTPN9P43378 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
PTPN9P43378 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.38□□□□□ -1.39
PTPN9P43378 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTPN9P43378 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTPN9P43378 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTPN9P43378 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.38□□□□□ -1.39
PTPN9P43378 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PTPN9P43378 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTPN9P43378 RNA5SP110-201ENST00000362638 115 ntBASIC6.38□□□□□ -1.39
PTPN9P43378 RNU105B-201ENST00000364478 208 ntBASIC6.38□□□□□ -1.39
PTPN9P43378 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
PTPN9P43378 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC6.38□□□□□ -1.39
PTPN9P43378 RBBP4P5-201ENST00000398583 1266 ntBASIC6.38□□□□□ -1.39
PTPN9P43378 RPS15AP30-201ENST00000420976 390 ntBASIC6.38□□□□□ -1.39
PTPN9P43378 AC130360.1-201ENST00000425489 1117 ntBASIC6.38□□□□□ -1.39
PTPN9P43378 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.38□□□□□ -1.39
PTPN9P43378 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.38□□□□□ -1.39
PTPN9P43378 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC6.38□□□□□ -1.39
PTPN9P43378 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.38□□□□□ -1.39
PTPN9P43378 RN7SL254P-201ENST00000460609 284 ntBASIC6.38□□□□□ -1.39
PTPN9P43378 AL049829.1-201ENST00000465411 156 ntBASIC6.38□□□□□ -1.39
PTPN9P43378 AC091874.2-201ENST00000505889 720 ntBASIC6.38□□□□□ -1.39
PTPN9P43378 AC112484.3-201ENST00000505910 329 ntBASIC6.38□□□□□ -1.39
PTPN9P43378 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC6.38□□□□□ -1.39
PTPN9P43378 CR383658.1-201ENST00000514609 734 ntBASIC6.38□□□□□ -1.39
PTPN9P43378 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.38□□□□□ -1.39
PTPN9P43378 AC130365.2-201ENST00000525882 1201 ntBASIC6.38□□□□□ -1.39
PTPN9P43378 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC6.38□□□□□ -1.39
PTPN9P43378 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.38□□□□□ -1.39
PTPN9P43378 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PTPN9P43378 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.38□□□□□ -1.39
PTPN9P43378 AC007494.1-201ENST00000562293 760 ntBASIC6.38□□□□□ -1.39
PTPN9P43378 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.38□□□□□ -1.39
PTPN9P43378 AC020915.5-201ENST00000596836 964 ntBASIC6.38□□□□□ -1.39
PTPN9P43378 AC005828.7-201ENST00000607331 556 ntBASIC6.38□□□□□ -1.39
PTPN9P43378 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
PTPN9P43378 AL109620.1-201ENST00000618738 1197 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms