Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 AL390119.1-201ENST00000440329 312 ntBASIC8.34□□□□□ -1.07
ATF3P18847 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC8.34□□□□□ -1.07
ATF3P18847 AC026254.2-201ENST00000475295 371 ntBASIC8.34□□□□□ -1.07
ATF3P18847 RN7SL547P-201ENST00000490793 290 ntBASIC8.34□□□□□ -1.07
ATF3P18847 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC8.34□□□□□ -1.07
ATF3P18847 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC8.34□□□□□ -1.07
ATF3P18847 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC8.34□□□□□ -1.07
ATF3P18847 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC8.34□□□□□ -1.07
ATF3P18847 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC8.34□□□□□ -1.07
ATF3P18847 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC8.34□□□□□ -1.07
ATF3P18847 DCN-209ENST00000546745 1026 ntTSL 3 BASIC8.34□□□□□ -1.07
ATF3P18847 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC8.34□□□□□ -1.07
ATF3P18847 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC8.34□□□□□ -1.07
ATF3P18847 AC027229.1-201ENST00000583887 253 ntBASIC8.34□□□□□ -1.07
ATF3P18847 AL512329.2-201ENST00000607350 548 ntBASIC8.34□□□□□ -1.07
ATF3P18847 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC8.34□□□□□ -1.07
ATF3P18847 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
ATF3P18847 LINC02019-201ENST00000608605 2060 ntBASIC8.34□□□□□ -1.07
ATF3P18847 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
ATF3P18847 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
ATF3P18847 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
ATF3P18847 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC8.34□□□□□ -1.08
ATF3P18847 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.08
ATF3P18847 AL355377.1-201ENST00000621125 1653 ntBASIC8.34□□□□□ -1.08
ATF3P18847 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
ATF3P18847 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
ATF3P18847 MAPK10-287ENST00000641217 3037 ntBASIC8.33□□□□□ -1.08
ATF3P18847 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
ATF3P18847 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
ATF3P18847 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC8.33□□□□□ -1.08
ATF3P18847 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
ATF3P18847 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
ATF3P18847 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC8.33□□□□□ -1.08
ATF3P18847 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
ATF3P18847 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC8.33□□□□□ -1.08
ATF3P18847 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
ATF3P18847 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
ATF3P18847 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC8.33□□□□□ -1.08
ATF3P18847 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC8.33□□□□□ -1.08
ATF3P18847 MRPL53P1-201ENST00000414323 319 ntBASIC8.33□□□□□ -1.08
ATF3P18847 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC8.33□□□□□ -1.08
ATF3P18847 RPA2P2-201ENST00000419698 796 ntBASIC8.33□□□□□ -1.08
ATF3P18847 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
ATF3P18847 MORF4L1P5-201ENST00000433352 961 ntBASIC8.33□□□□□ -1.08
ATF3P18847 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC8.33□□□□□ -1.08
ATF3P18847 FTH1P20-201ENST00000434913 548 ntBASIC8.33□□□□□ -1.08
ATF3P18847 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC8.33□□□□□ -1.08
ATF3P18847 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC8.33□□□□□ -1.08
ATF3P18847 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC8.33□□□□□ -1.08
ATF3P18847 AC084337.1-201ENST00000524809 686 ntBASIC8.33□□□□□ -1.08
ATF3P18847 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
ATF3P18847 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC8.33□□□□□ -1.08
ATF3P18847 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC8.33□□□□□ -1.08
ATF3P18847 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC8.33□□□□□ -1.08
ATF3P18847 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC8.33□□□□□ -1.08
ATF3P18847 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC8.33□□□□□ -1.08
ATF3P18847 LAPTM4BP2-201ENST00000604542 446 ntBASIC8.33□□□□□ -1.08
ATF3P18847 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC8.33□□□□□ -1.08
ATF3P18847 MIR6837-201ENST00000620884 64 ntBASIC8.33□□□□□ -1.08
ATF3P18847 AL137067.2-201ENST00000621202 131 ntBASIC8.33□□□□□ -1.08
ATF3P18847 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
ATF3P18847 AC132825.8-201ENST00000640783 297 ntBASIC8.33□□□□□ -1.08
ATF3P18847 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
ATF3P18847 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
ATF3P18847 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC8.33□□□□□ -1.08
ATF3P18847 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC8.33□□□□□ -1.08
ATF3P18847 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
ATF3P18847 EEF1A1P14-201ENST00000421195 1376 ntBASIC8.33□□□□□ -1.08
ATF3P18847 AL161756.3-201ENST00000641216 2071 ntBASIC8.33□□□□□ -1.08
ATF3P18847 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
ATF3P18847 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC8.33□□□□□ -1.08
ATF3P18847 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
ATF3P18847 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC8.32□□□□□ -1.08
ATF3P18847 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC8.32□□□□□ -1.08
ATF3P18847 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
ATF3P18847 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
ATF3P18847 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
ATF3P18847 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC8.32□□□□□ -1.08
ATF3P18847 OR2M1P-201ENST00000318104 951 ntBASIC8.32□□□□□ -1.08
ATF3P18847 MIR223-201ENST00000385204 110 ntBASIC8.32□□□□□ -1.08
ATF3P18847 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC8.32□□□□□ -1.08
ATF3P18847 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
ATF3P18847 CNOT7P2-201ENST00000441051 832 ntBASIC8.32□□□□□ -1.08
ATF3P18847 RPL35AP19-201ENST00000469425 329 ntBASIC8.32□□□□□ -1.08
ATF3P18847 AC022215.1-201ENST00000481770 362 ntBASIC8.32□□□□□ -1.08
ATF3P18847 AC008629.2-201ENST00000503783 483 ntBASIC8.32□□□□□ -1.08
ATF3P18847 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC8.32□□□□□ -1.08
ATF3P18847 AC115837.1-201ENST00000517662 1001 ntBASIC8.32□□□□□ -1.08
ATF3P18847 CDC42P3-201ENST00000518493 633 ntBASIC8.32□□□□□ -1.08
ATF3P18847 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
ATF3P18847 HMGB1P42-201ENST00000532126 553 ntBASIC8.32□□□□□ -1.08
ATF3P18847 RPA2P3-201ENST00000533268 770 ntBASIC8.32□□□□□ -1.08
ATF3P18847 HMGN2P6-201ENST00000551091 273 ntBASIC8.32□□□□□ -1.08
ATF3P18847 AL121579.2-201ENST00000555466 590 ntBASIC8.32□□□□□ -1.08
ATF3P18847 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC8.32□□□□□ -1.08
ATF3P18847 AL445222.1-201ENST00000607259 628 ntBASIC8.32□□□□□ -1.08
ATF3P18847 AC116631.1-202ENST00000640984 683 ntBASIC8.32□□□□□ -1.08
ATF3P18847 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
ATF3P18847 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
ATF3P18847 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms