Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.55□□□□□ -1.52
SPTA1P02549 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SPTA1P02549 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SPTA1P02549 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
SPTA1P02549 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC5.55□□□□□ -1.52
SPTA1P02549 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.55□□□□□ -1.52
SPTA1P02549 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.54□□□□□ -1.52
SPTA1P02549 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.54□□□□□ -1.52
SPTA1P02549 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SPTA1P02549 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SPTA1P02549 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SPTA1P02549 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SPTA1P02549 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.54□□□□□ -1.52
SPTA1P02549 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SPTA1P02549 RPL5P5-201ENST00000392009 893 ntBASIC5.54□□□□□ -1.52
SPTA1P02549 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.54□□□□□ -1.52
SPTA1P02549 BX119917.1-201ENST00000432517 502 ntBASIC5.54□□□□□ -1.52
SPTA1P02549 CFL1P1-202ENST00000432948 411 ntBASIC5.54□□□□□ -1.52
SPTA1P02549 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.54□□□□□ -1.52
SPTA1P02549 RPL5P9-201ENST00000448118 886 ntBASIC5.54□□□□□ -1.52
SPTA1P02549 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.54□□□□□ -1.52
SPTA1P02549 AC138866.2-201ENST00000508650 584 ntBASIC5.54□□□□□ -1.52
SPTA1P02549 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.54□□□□□ -1.52
SPTA1P02549 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SPTA1P02549 HNRNPCP1-201ENST00000556181 766 ntBASIC5.54□□□□□ -1.52
SPTA1P02549 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SPTA1P02549 MIR4776-2-201ENST00000580204 80 ntBASIC5.54□□□□□ -1.52
SPTA1P02549 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SPTA1P02549 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SPTA1P02549 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.54□□□□□ -1.52
SPTA1P02549 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SPTA1P02549 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SPTA1P02549 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
SPTA1P02549 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC5.54□□□□□ -1.52
SPTA1P02549 CREM-208ENST00000361599 2170 ntTSL 5 BASIC5.54□□□□□ -1.52
SPTA1P02549 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SPTA1P02549 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SPTA1P02549 AF287957.1-201ENST00000607368 1595 ntBASIC5.54□□□□□ -1.52
SPTA1P02549 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC5.54□□□□□ -1.52
SPTA1P02549 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SPTA1P02549 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SPTA1P02549 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SPTA1P02549 RNVU1-6-201ENST00000364688 164 ntBASIC5.54□□□□□ -1.52
SPTA1P02549 MIR541-201ENST00000401360 84 ntBASIC5.54□□□□□ -1.52
SPTA1P02549 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC5.54□□□□□ -1.52
SPTA1P02549 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.54□□□□□ -1.52
SPTA1P02549 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
SPTA1P02549 RN7SL222P-201ENST00000476452 299 ntBASIC5.54□□□□□ -1.52
SPTA1P02549 RPL7AP6-201ENST00000477943 801 ntBASIC5.54□□□□□ -1.52
SPTA1P02549 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC5.54□□□□□ -1.52
SPTA1P02549 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.54□□□□□ -1.52
SPTA1P02549 IGLV3-6-201ENST00000523937 250 ntBASIC5.54□□□□□ -1.52
SPTA1P02549 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.54□□□□□ -1.52
SPTA1P02549 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC5.54□□□□□ -1.52
SPTA1P02549 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.54□□□□□ -1.52
SPTA1P02549 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.54□□□□□ -1.52
SPTA1P02549 OR1N1-202ENST00000619659 939 ntBASIC5.54□□□□□ -1.52
SPTA1P02549 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SPTA1P02549 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SPTA1P02549 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC5.53□□□□□ -1.52
SPTA1P02549 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SPTA1P02549 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SPTA1P02549 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.53□□□□□ -1.52
SPTA1P02549 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SPTA1P02549 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SPTA1P02549 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SPTA1P02549 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SPTA1P02549 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SPTA1P02549 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SPTA1P02549 METTL15P3-201ENST00000415522 1221 ntBASIC5.53□□□□□ -1.52
SPTA1P02549 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.53□□□□□ -1.52
SPTA1P02549 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SPTA1P02549 RN7SL385P-201ENST00000468873 276 ntBASIC5.53□□□□□ -1.52
SPTA1P02549 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.53□□□□□ -1.52
SPTA1P02549 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.53□□□□□ -1.52
SPTA1P02549 AC096996.1-201ENST00000563813 325 ntBASIC5.53□□□□□ -1.52
SPTA1P02549 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.53□□□□□ -1.52
SPTA1P02549 AC005244.1-201ENST00000582566 339 ntBASIC5.53□□□□□ -1.52
SPTA1P02549 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.53□□□□□ -1.52
SPTA1P02549 OR7A11P-201ENST00000597719 953 ntBASIC5.53□□□□□ -1.52
SPTA1P02549 AP000346.3-201ENST00000622821 210 ntBASIC5.53□□□□□ -1.52
SPTA1P02549 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.53□□□□□ -1.52
SPTA1P02549 AC183089.2-201ENST00000637931 916 ntBASIC5.53□□□□□ -1.52
SPTA1P02549 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SPTA1P02549 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC5.53□□□□□ -1.52
SPTA1P02549 MELK-207ENST00000536860 2342 ntTSL 2 BASIC5.53□□□□□ -1.52
SPTA1P02549 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SPTA1P02549 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SPTA1P02549 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SPTA1P02549 MRE11P1-201ENST00000464884 2127 ntBASIC5.53□□□□□ -1.52
SPTA1P02549 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.53□□□□□ -1.52
SPTA1P02549 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC5.53□□□□□ -1.52
SPTA1P02549 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SPTA1P02549 AC010132.2-201ENST00000295493 1043 ntBASIC5.53□□□□□ -1.52
SPTA1P02549 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SPTA1P02549 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SPTA1P02549 RNA5SP156-201ENST00000410250 110 ntBASIC5.53□□□□□ -1.52
SPTA1P02549 RN7SKP213-201ENST00000410746 298 ntBASIC5.53□□□□□ -1.52
SPTA1P02549 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC5.53□□□□□ -1.52
SPTA1P02549 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms