Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 VIM2P-201ENST00000402383 1294 ntBASIC5.69□□□□□ -1.5
SSX4O60224 AL359694.1-201ENST00000403247 604 ntBASIC5.69□□□□□ -1.5
SSX4O60224 PRELID1P1-201ENST00000403549 660 ntBASIC5.69□□□□□ -1.5
SSX4O60224 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.69□□□□□ -1.5
SSX4O60224 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.69□□□□□ -1.5
SSX4O60224 RPL7AP14-201ENST00000424041 802 ntBASIC5.69□□□□□ -1.5
SSX4O60224 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.69□□□□□ -1.5
SSX4O60224 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.69□□□□□ -1.5
SSX4O60224 RPL12P11-201ENST00000439970 501 ntBASIC5.69□□□□□ -1.5
SSX4O60224 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SSX4O60224 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.69□□□□□ -1.5
SSX4O60224 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.69□□□□□ -1.5
SSX4O60224 AL513343.1-201ENST00000451818 792 ntBASIC5.69□□□□□ -1.5
SSX4O60224 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.69□□□□□ -1.5
SSX4O60224 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.69□□□□□ -1.5
SSX4O60224 AC106822.1-201ENST00000502647 526 ntBASIC5.69□□□□□ -1.5
SSX4O60224 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.69□□□□□ -1.5
SSX4O60224 AC083906.1-201ENST00000509298 406 ntBASIC5.69□□□□□ -1.5
SSX4O60224 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.69□□□□□ -1.5
SSX4O60224 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SSX4O60224 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSX4O60224 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.69□□□□□ -1.5
SSX4O60224 NPM1P5-201ENST00000557228 838 ntBASIC5.69□□□□□ -1.5
SSX4O60224 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSX4O60224 OR4H6P-201ENST00000563771 921 ntBASIC5.69□□□□□ -1.5
SSX4O60224 FAM60CP-201ENST00000591086 664 ntBASIC5.69□□□□□ -1.5
SSX4O60224 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.69□□□□□ -1.5
SSX4O60224 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.69□□□□□ -1.5
SSX4O60224 MIR6071-201ENST00000616741 78 ntBASIC5.69□□□□□ -1.5
SSX4O60224 AC241377.1-201ENST00000619797 406 ntBASIC5.69□□□□□ -1.5
SSX4O60224 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.69□□□□□ -1.5
SSX4O60224 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.69□□□□□ -1.5
SSX4O60224 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSX4O60224 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SSX4O60224 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSX4O60224 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSX4O60224 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SSX4O60224 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX4O60224 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX4O60224 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX4O60224 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSX4O60224 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSX4O60224 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
SSX4O60224 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.68□□□□□ -1.5
SSX4O60224 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SSX4O60224 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SSX4O60224 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSX4O60224 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SSX4O60224 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSX4O60224 AC138907.8-201ENST00000623981 2256 ntBASIC5.68□□□□□ -1.5
SSX4O60224 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSX4O60224 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.68□□□□□ -1.5
SSX4O60224 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSX4O60224 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.68□□□□□ -1.5
SSX4O60224 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.68□□□□□ -1.5
SSX4O60224 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSX4O60224 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSX4O60224 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSX4O60224 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.68□□□□□ -1.5
SSX4O60224 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.68□□□□□ -1.5
SSX4O60224 YWHAZP4-201ENST00000392459 708 ntBASIC5.68□□□□□ -1.5
SSX4O60224 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSX4O60224 HMGA1P8-201ENST00000414130 321 ntBASIC5.68□□□□□ -1.5
SSX4O60224 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.68□□□□□ -1.5
SSX4O60224 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.68□□□□□ -1.5
SSX4O60224 AC007064.3-201ENST00000422608 359 ntBASIC5.68□□□□□ -1.5
SSX4O60224 OR5W1P-201ENST00000423705 938 ntBASIC5.68□□□□□ -1.5
SSX4O60224 AL590399.2-201ENST00000427536 309 ntBASIC5.68□□□□□ -1.5
SSX4O60224 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SSX4O60224 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.68□□□□□ -1.5
SSX4O60224 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.68□□□□□ -1.5
SSX4O60224 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.68□□□□□ -1.5
SSX4O60224 REG1CP-206ENST00000447469 496 ntBASIC5.68□□□□□ -1.5
SSX4O60224 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.68□□□□□ -1.5
SSX4O60224 AC103563.5-201ENST00000455643 364 ntBASIC5.68□□□□□ -1.5
SSX4O60224 TPRKBP1-201ENST00000456243 481 ntBASIC5.68□□□□□ -1.5
SSX4O60224 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.68□□□□□ -1.5
SSX4O60224 AL355032.1-201ENST00000472981 438 ntBASIC5.68□□□□□ -1.5
SSX4O60224 CR383656.1-201ENST00000484916 377 ntBASIC5.68□□□□□ -1.5
SSX4O60224 AC021006.1-201ENST00000489849 553 ntBASIC5.68□□□□□ -1.5
SSX4O60224 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.68□□□□□ -1.5
SSX4O60224 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.68□□□□□ -1.5
SSX4O60224 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.68□□□□□ -1.5
SSX4O60224 AC112484.3-201ENST00000505910 329 ntBASIC5.68□□□□□ -1.5
SSX4O60224 AL390198.2-201ENST00000510553 222 ntBASIC5.68□□□□□ -1.5
SSX4O60224 AP002981.1-201ENST00000517692 975 ntBASIC5.68□□□□□ -1.5
SSX4O60224 NPM1P52-201ENST00000518264 846 ntBASIC5.68□□□□□ -1.5
SSX4O60224 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.68□□□□□ -1.5
SSX4O60224 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC5.68□□□□□ -1.5
SSX4O60224 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.68□□□□□ -1.5
SSX4O60224 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSX4O60224 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.68□□□□□ -1.5
SSX4O60224 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.68□□□□□ -1.5
SSX4O60224 AC091133.5-201ENST00000603088 301 ntBASIC5.68□□□□□ -1.5
SSX4O60224 KATNBL1P1-201ENST00000605192 748 ntBASIC5.68□□□□□ -1.5
SSX4O60224 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.68□□□□□ -1.5
SSX4O60224 AC024255.1-201ENST00000614376 102 ntBASIC5.68□□□□□ -1.5
SSX4O60224 AL355480.1-201ENST00000629041 99 ntBASIC5.68□□□□□ -1.5
SSX4O60224 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSX4O60224 AL731532.1-201ENST00000623972 4236 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms