Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.32□□□□□ -1.4
RAI2Q9Y5P3 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.32□□□□□ -1.4
RAI2Q9Y5P3 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.32□□□□□ -1.4
RAI2Q9Y5P3 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.32□□□□□ -1.4
RAI2Q9Y5P3 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.32□□□□□ -1.4
RAI2Q9Y5P3 AC022467.1-201ENST00000614738 749 ntBASIC6.32□□□□□ -1.4
RAI2Q9Y5P3 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.32□□□□□ -1.4
RAI2Q9Y5P3 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
RAI2Q9Y5P3 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
RAI2Q9Y5P3 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
RAI2Q9Y5P3 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RAI2Q9Y5P3 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RAI2Q9Y5P3 WBP11P1-201ENST00000562560 1931 ntBASIC6.32□□□□□ -1.4
RAI2Q9Y5P3 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RAI2Q9Y5P3 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
RAI2Q9Y5P3 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.32□□□□□ -1.4
RAI2Q9Y5P3 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
RAI2Q9Y5P3 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RAI2Q9Y5P3 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RAI2Q9Y5P3 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 LINC01616-201ENST00000561816 2280 ntBASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 RSL24D1P8-201ENST00000434442 492 ntBASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 PPIAP10-201ENST00000438675 458 ntBASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 OR13K1P-201ENST00000444577 975 ntBASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 RPL31P15-201ENST00000449770 338 ntBASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 RN7SL165P-201ENST00000477476 291 ntBASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 AC095052.1-201ENST00000509955 863 ntBASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 AC006499.4-201ENST00000510947 694 ntBASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 RNA5SP400-201ENST00000517155 111 ntBASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 AC027369.2-201ENST00000528030 440 ntBASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 AC036111.2-201ENST00000533247 901 ntBASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 AC027544.3-201ENST00000535082 757 ntBASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 AP001858.2-201ENST00000536213 601 ntBASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 MIR3189-201ENST00000578735 73 ntBASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 AC027229.1-201ENST00000583887 253 ntBASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 AC005014.3-201ENST00000605985 190 ntBASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 AC022034.1-201ENST00000512867 2156 ntBASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.31□□□□□ -1.4
RAI2Q9Y5P3 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 AC233968.1-201ENST00000611212 1300 ntBASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 RNU1-49P-201ENST00000363468 159 ntBASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 SNORD8-201ENST00000363915 110 ntBASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 AC083799.1-201ENST00000366451 910 ntBASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 AC087752.1-201ENST00000391360 558 ntBASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 RNA5SP178-201ENST00000410380 128 ntBASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 AC007568.1-201ENST00000422912 471 ntBASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 AC016908.1-201ENST00000442571 1219 ntBASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 AL022237.1-201ENST00000446663 358 ntBASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.3□□□□□ -1.4
RAI2Q9Y5P3 HIGD1AP16-201ENST00000450986 258 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms