Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC003992.1-201ENST00000635364 557 ntBASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 ZNF969P-201ENST00000510345 2341 ntBASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRAPPC4Q9Y296 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.52
TRAPPC4Q9Y296 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
TRAPPC4Q9Y296 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRAPPC4Q9Y296 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRAPPC4Q9Y296 AL731532.1-201ENST00000623972 4236 ntBASIC5.59□□□□□ -1.52
TRAPPC4Q9Y296 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
TRAPPC4Q9Y296 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 AC004656.1-201ENST00000568479 4951 ntBASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 AP001541.1-201ENST00000623322 1904 ntBASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 SNORA43.1-201ENST00000364863 140 ntBASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 RNU6-316P-201ENST00000391027 107 ntBASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 PEX12P1-201ENST00000400284 1048 ntBASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 HSPE1P27-201ENST00000430808 296 ntBASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 RPSAP32-201ENST00000432681 526 ntBASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 AC096632.2-201ENST00000438139 1239 ntBASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 GAPDHP23-201ENST00000444823 993 ntBASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 DEFB109A-201ENST00000482450 265 ntBASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 NPIPB14P-203ENST00000532298 987 ntBASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 AL591167.1-201ENST00000607321 456 ntBASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.58□□□□□ -1.52
TRAPPC4Q9Y296 AL359955.1-201ENST00000455242 3275 ntBASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 HDAC1P2-201ENST00000453661 1398 ntBASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 AC004158.1-201ENST00000564508 4319 ntBASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 U3.10-201ENST00000364459 214 ntBASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 RPS27AP6-201ENST00000427962 448 ntBASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 BX119904.3-201ENST00000428194 957 ntBASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 AC010086.1-201ENST00000437359 1052 ntBASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 OR3D1P-201ENST00000438288 955 ntBASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 AL590004.3-202ENST00000445883 451 ntBASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 RARRES2P3-201ENST00000457739 473 ntBASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 RPL34P33-201ENST00000486062 334 ntBASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 AC113367.2-201ENST00000505749 160 ntBASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 ZNF519P4-201ENST00000514008 125 ntBASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 AC019322.1-201ENST00000571869 389 ntBASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 AL078601.3-201ENST00000573303 535 ntBASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 SMIM12P1-201ENST00000603004 274 ntBASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 AC002069.2-201ENST00000603580 883 ntBASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 AC004890.3-201ENST00000605566 1095 ntBASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 AL135999.3-201ENST00000610501 812 ntBASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 MAPK10-350ENST00000641777 965 ntBASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRAPPC4Q9Y296 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms