Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 RNA5SP156-201ENST00000410250 110 ntBASIC5.64□□□□□ -1.51
VAPAQ9P0L0 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 AL354868.1-201ENST00000417077 482 ntBASIC5.64□□□□□ -1.51
VAPAQ9P0L0 NMD3P2-201ENST00000421815 761 ntBASIC5.64□□□□□ -1.51
VAPAQ9P0L0 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 AC096632.2-201ENST00000438139 1239 ntBASIC5.64□□□□□ -1.51
VAPAQ9P0L0 AL590004.3-202ENST00000445883 451 ntBASIC5.64□□□□□ -1.51
VAPAQ9P0L0 RPL12P39-201ENST00000455456 496 ntBASIC5.64□□□□□ -1.51
VAPAQ9P0L0 AL603882.1-201ENST00000463059 681 ntBASIC5.64□□□□□ -1.51
VAPAQ9P0L0 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 AC079080.1-201ENST00000479841 822 ntBASIC5.64□□□□□ -1.51
VAPAQ9P0L0 RPL38P3-201ENST00000484463 213 ntBASIC5.64□□□□□ -1.51
VAPAQ9P0L0 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.64□□□□□ -1.51
VAPAQ9P0L0 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 OR56A7P-201ENST00000524865 941 ntBASIC5.64□□□□□ -1.51
VAPAQ9P0L0 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 AC005632.2-201ENST00000564271 828 ntBASIC5.64□□□□□ -1.51
VAPAQ9P0L0 AC090826.1-203ENST00000569235 490 ntBASIC5.64□□□□□ -1.51
VAPAQ9P0L0 MIR4433B-201ENST00000581329 102 ntBASIC5.64□□□□□ -1.51
VAPAQ9P0L0 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 MIR212-201ENST00000586026 110 ntBASIC5.64□□□□□ -1.51
VAPAQ9P0L0 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 GAPDHP41-201ENST00000613707 975 ntBASIC5.64□□□□□ -1.51
VAPAQ9P0L0 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 AL049634.1-201ENST00000453770 1720 ntBASIC5.64□□□□□ -1.51
VAPAQ9P0L0 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.64□□□□□ -1.51
VAPAQ9P0L0 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 AC006600.2-201ENST00000624834 2506 ntBASIC5.63□□□□□ -1.51
VAPAQ9P0L0 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 RNA5SP211-201ENST00000365516 117 ntBASIC5.63□□□□□ -1.51
VAPAQ9P0L0 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 NFU1P1-201ENST00000413128 774 ntBASIC5.63□□□□□ -1.51
VAPAQ9P0L0 METTL15P3-201ENST00000415522 1221 ntBASIC5.63□□□□□ -1.51
VAPAQ9P0L0 AC117434.1-201ENST00000419971 836 ntBASIC5.63□□□□□ -1.51
VAPAQ9P0L0 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 PSMD10P2-201ENST00000432890 672 ntBASIC5.63□□□□□ -1.51
VAPAQ9P0L0 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 AL031681.1-201ENST00000443304 400 ntBASIC5.63□□□□□ -1.51
VAPAQ9P0L0 WDR82P2-201ENST00000444540 928 ntBASIC5.63□□□□□ -1.51
VAPAQ9P0L0 PDCL3P4-201ENST00000489621 720 ntBASIC5.63□□□□□ -1.51
VAPAQ9P0L0 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 AC036111.2-201ENST00000533247 901 ntBASIC5.63□□□□□ -1.51
VAPAQ9P0L0 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 LSM1P2-201ENST00000604911 322 ntBASIC5.63□□□□□ -1.51
VAPAQ9P0L0 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 AL122023.1-201ENST00000622847 530 ntBASIC5.63□□□□□ -1.51
VAPAQ9P0L0 AC022400.9-201ENST00000623633 273 ntBASIC5.63□□□□□ -1.51
VAPAQ9P0L0 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VAPAQ9P0L0 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 CASC19-260ENST00000641828 2001 ntBASIC5.62□□□□□ -1.51
VAPAQ9P0L0 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VAPAQ9P0L0 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms