Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC002553.3-201ENST00000453002 341 ntBASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 FRG2FP-204ENST00000453982 852 ntBASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 OR7E22P-201ENST00000478335 1035 ntBASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 AP001267.4-201ENST00000602598 545 ntBASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 AL645933.2-201ENST00000606743 1207 ntBASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 AC022400.9-201ENST00000623633 273 ntBASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 NCOA4P2-201ENST00000340589 1813 ntBASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 MFSD8-239ENST00000641590 2479 ntBASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 AC140479.2-201ENST00000421567 3130 ntBASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.5□□□□□ -1.53
RSPO3Q9BXY4 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 RNA5SP211-201ENST00000365516 117 ntBASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 AC092642.1-201ENST00000392417 425 ntBASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 YWHAZP6-201ENST00000399764 738 ntBASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 PSMA6P1-201ENST00000400275 741 ntBASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 RNA5SP156-201ENST00000410250 110 ntBASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 AL354890.1-201ENST00000413730 346 ntBASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 SEPT14P12-201ENST00000442280 560 ntBASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 FTLP8-201ENST00000446770 267 ntBASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 AL358876.1-201ENST00000453364 1075 ntBASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 PPIAP7-201ENST00000454070 489 ntBASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 AC118758.1-202ENST00000454719 225 ntBASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 RPL12P39-201ENST00000455456 496 ntBASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 IGKV3D-25-201ENST00000519599 235 ntBASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 AP000620.1-201ENST00000527147 504 ntBASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 MT1CP-201ENST00000567054 174 ntBASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 uc_338.29-201ENST00000615099 168 ntBASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 AC073488.3-201ENST00000631611 778 ntBASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 AL022323.4-201ENST00000623980 13120 ntBASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 AL354854.1-201ENST00000455940 1363 ntBASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 AC018628.1-201ENST00000624147 3819 ntBASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RSPO3Q9BXY4 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 AC015799.1-201ENST00000622996 3122 ntBASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 RN7SKP78-201ENST00000364711 318 ntBASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 RN7SKP144-201ENST00000411108 279 ntBASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 NME1P1-201ENST00000420914 382 ntBASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 AC099782.1-201ENST00000425889 474 ntBASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 GAPDHP48-201ENST00000436626 961 ntBASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 AC010240.2-201ENST00000445363 1205 ntBASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 OSTCP1-201ENST00000455507 450 ntBASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 AC004129.2-201ENST00000457229 287 ntBASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 AL603882.1-201ENST00000463059 681 ntBASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 AL157777.1-201ENST00000468100 304 ntBASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 PFN1P8-201ENST00000497012 543 ntBASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.48□□□□□ -1.53
RSPO3Q9BXY4 MIR2117-201ENST00000516780 80 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms