Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6□□□□□ -1.45
PDLIM5Q96HC4 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6□□□□□ -1.45
PDLIM5Q96HC4 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 AL442128.2-201ENST00000620246 1824 ntBASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 AL034417.1-201ENST00000399343 800 ntBASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 AL590399.4-201ENST00000436561 601 ntBASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 LINC00328-2P-201ENST00000436585 219 ntBASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 AL162739.1-201ENST00000450606 307 ntBASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 RN7SL552P-201ENST00000462094 276 ntBASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 ZNF519P4-201ENST00000514008 125 ntBASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 AC244502.2-201ENST00000543361 851 ntBASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 WBP1LP12-201ENST00000604449 331 ntBASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 AL080312.2-201ENST00000613001 630 ntBASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 AC096861.1-201ENST00000616652 240 ntBASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 AC007603.3-201ENST00000636915 979 ntBASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 AC022325.1-201ENST00000502748 2199 ntBASIC5.99□□□□□ -1.45
PDLIM5Q96HC4 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 AL121977.1-201ENST00000401636 979 ntBASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 RN7SKP108-201ENST00000411367 328 ntBASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 CDY17P-201ENST00000414121 1282 ntBASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 AC096644.3-201ENST00000416788 338 ntBASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 CDY8P-201ENST00000428380 1279 ntBASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 CDY20P-201ENST00000447528 1279 ntBASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 RN7SL836P-201ENST00000476140 296 ntBASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 SNX18P25-201ENST00000510539 758 ntBASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 MIR4701-201ENST00000583094 63 ntBASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 AP005136.2-201ENST00000583253 1049 ntBASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 MIR132-201ENST00000591554 101 ntBASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 AC015819.1-201ENST00000613588 663 ntBASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 OR8G7P-201ENST00000616658 848 ntBASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 AC069234.4-201ENST00000621276 412 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms