Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC008937.3-201ENST00000606813 1700 ntBASIC9.23□□□□□ -0.93
CFAP43Q8NDM7 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
CFAP43Q8NDM7 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CFAP43Q8NDM7 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
CFAP43Q8NDM7 SNRPEP6-201ENST00000407465 277 ntBASIC9.23□□□□□ -0.93
CFAP43Q8NDM7 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC9.23□□□□□ -0.93
CFAP43Q8NDM7 RBMY2KP-201ENST00000418221 992 ntBASIC9.23□□□□□ -0.93
CFAP43Q8NDM7 RPS4XP5-201ENST00000419038 768 ntBASIC9.23□□□□□ -0.93
CFAP43Q8NDM7 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC9.23□□□□□ -0.93
CFAP43Q8NDM7 AURKAPS1-201ENST00000451805 1212 ntBASIC9.23□□□□□ -0.93
CFAP43Q8NDM7 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC9.23□□□□□ -0.93
CFAP43Q8NDM7 RNA5SP228-201ENST00000516232 133 ntBASIC9.23□□□□□ -0.93
CFAP43Q8NDM7 NRBF2P4-201ENST00000520874 850 ntBASIC9.23□□□□□ -0.93
CFAP43Q8NDM7 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC9.23□□□□□ -0.93
CFAP43Q8NDM7 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC9.23□□□□□ -0.93
CFAP43Q8NDM7 CASC19-264ENST00000641912 1184 ntBASIC9.23□□□□□ -0.93
CFAP43Q8NDM7 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 USP9YP3-201ENST00000434481 1766 ntBASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 AL645937.3-201ENST00000453647 936 ntBASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 AC100832.1-201ENST00000471945 383 ntBASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 AC022215.1-201ENST00000481770 362 ntBASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 RN7SL30P-201ENST00000488416 306 ntBASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 AL049539.1-201ENST00000611964 459 ntBASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 AL121612.2-201ENST00000612261 482 ntBASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 AL139805.2-201ENST00000455305 2433 ntBASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CFAP43Q8NDM7 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CFAP43Q8NDM7 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CFAP43Q8NDM7 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
CFAP43Q8NDM7 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC9.21□□□□□ -0.93
CFAP43Q8NDM7 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
CFAP43Q8NDM7 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
CFAP43Q8NDM7 RPL23AP27-201ENST00000415161 451 ntBASIC9.21□□□□□ -0.93
CFAP43Q8NDM7 CDC42P3-201ENST00000518493 633 ntBASIC9.21□□□□□ -0.93
CFAP43Q8NDM7 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC9.21□□□□□ -0.93
CFAP43Q8NDM7 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC9.21□□□□□ -0.93
CFAP43Q8NDM7 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC9.21□□□□□ -0.93
CFAP43Q8NDM7 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC9.21□□□□□ -0.93
CFAP43Q8NDM7 AC136428.4-201ENST00000634254 1155 ntBASIC9.21□□□□□ -0.93
CFAP43Q8NDM7 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC9.21□□□□□ -0.94
CFAP43Q8NDM7 AC006213.6-201ENST00000623722 4179 ntBASIC9.21□□□□□ -0.94
CFAP43Q8NDM7 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
CFAP43Q8NDM7 MRRFP1-201ENST00000435941 1675 ntBASIC9.21□□□□□ -0.94
CFAP43Q8NDM7 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
CFAP43Q8NDM7 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
CFAP43Q8NDM7 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.94
CFAP43Q8NDM7 DOCK11P1-201ENST00000553480 5932 ntBASIC9.21□□□□□ -0.94
CFAP43Q8NDM7 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 AP003170.5-201ENST00000397185 335 ntBASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 CBX1P2-201ENST00000453841 458 ntBASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 RPL35AP19-201ENST00000469425 329 ntBASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 RPL7AP6-201ENST00000477943 801 ntBASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 AC087360.1-201ENST00000518788 616 ntBASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 AP000676.2-201ENST00000529711 301 ntBASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 AC007494.1-201ENST00000562293 760 ntBASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 TAS2R6P-201ENST00000605022 826 ntBASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 AL589647.1-201ENST00000402485 466 ntBASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 RNA5SP251-201ENST00000410614 137 ntBASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 HMGB3P24-201ENST00000433260 622 ntBASIC9.2□□□□□ -0.94
CFAP43Q8NDM7 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms