Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 AC015819.1-201ENST00000613588 663 ntBASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CDKL3Q8IVW4 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 AC005224.3-201ENST00000584683 2140 ntBASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 RNA5SP211-201ENST00000365516 117 ntBASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 AL034417.1-201ENST00000399343 800 ntBASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 RN7SKP108-201ENST00000411367 328 ntBASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 AC092865.3-201ENST00000425390 1026 ntBASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 USP24P1-201ENST00000433802 779 ntBASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 FTLP8-201ENST00000446770 267 ntBASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 SDC4P-201ENST00000453285 601 ntBASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 AC104164.1-201ENST00000460282 590 ntBASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 AC128716.1-201ENST00000475129 166 ntBASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 AC108103.1-201ENST00000511286 446 ntBASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 AP001000.1-201ENST00000526843 742 ntBASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 AC119674.1-217ENST00000641942 1086 ntBASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 AC027575.3-201ENST00000583058 2747 ntBASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDKL3Q8IVW4 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 AC119674.1-202ENST00000641333 1860 ntBASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 RNU1-134P-201ENST00000362935 165 ntBASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 RPSAP32-201ENST00000432681 526 ntBASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 TRIM60P16-201ENST00000444048 694 ntBASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 RPL29P23-201ENST00000486188 442 ntBASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 HMGN1P17-201ENST00000513734 295 ntBASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 snoU109.5-201ENST00000516231 132 ntBASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 SNORA81.2-201ENST00000516868 170 ntBASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 AL078601.3-201ENST00000573303 535 ntBASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 RN7SL230P-201ENST00000580835 303 ntBASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 AL355974.3-201ENST00000617383 467 ntBASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 AL512652.1-201ENST00000619006 500 ntBASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 SNX18P12-201ENST00000624821 759 ntBASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.16□□□□□ -1.42
CDKL3Q8IVW4 AC120036.2-201ENST00000509729 1474 ntBASIC6.15□□□□□ -1.42
CDKL3Q8IVW4 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms