Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC005609.2-201ENST00000623320 592 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 MTND5P42-201ENST00000637720 498 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 SSXP3-201ENST00000442971 1300 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 AC022507.1-201ENST00000548349 1505 ntBASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
FOXR1Q6PIV2 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 CEACAM5-208ENST00000615021 1694 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 SEPT4-211ENST00000579371 1362 ntTSL 5 BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 AL121657.1-201ENST00000327215 531 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 Y_RNA.38-201ENST00000362617 102 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 SNORD46-201ENST00000364043 104 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 RNU4-12P-201ENST00000365233 139 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 SNORD3J-201ENST00000408473 190 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 TPMTP3-201ENST00000411928 735 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 CRIP1P3-201ENST00000416794 220 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 AC019181.1-201ENST00000417151 310 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 RPL12P43-201ENST00000420608 499 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 DNAJA1P2-201ENST00000421360 1197 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 ARAFP1-201ENST00000422172 605 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 AL513174.1-201ENST00000423182 629 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 LINC02088-201ENST00000428134 620 ntTSL 3 BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 MTCO1P45-201ENST00000431457 267 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 RPL7P14-201ENST00000449851 741 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 AL096803.1-201ENST00000456921 1021 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 HMGB1P3-201ENST00000502802 616 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 AC084871.2-201ENST00000503355 464 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 NDUFA5P12-201ENST00000503796 343 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 AF186996.3-201ENST00000509527 964 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 MTND3P22-201ENST00000510932 243 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 SETP21-201ENST00000514799 892 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 RN7SKP98-201ENST00000517070 156 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 IGHVII-78-1-201ENST00000521105 269 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 LINC02489-201ENST00000527239 354 ntTSL 3 BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 AL352979.3-201ENST00000553515 247 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 AC006530.1-201ENST00000555980 571 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 GSTZ1-216ENST00000556627 919 ntTSL 3 BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 AC012182.1-201ENST00000570133 895 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 AC015871.2-201ENST00000603605 948 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 AL365503.1-201ENST00000605247 905 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 AC084876.1-201ENST00000612793 641 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 AL607023.1-201ENST00000620045 248 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 SAMMSON-214ENST00000641395 1264 ntBASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
FOXR1Q6PIV2 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
FOXR1Q6PIV2 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
FOXR1Q6PIV2 LINC00662-203ENST00000586954 2254 ntTSL 2 BASIC7.9□□□□□ -1.15
FOXR1Q6PIV2 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
FOXR1Q6PIV2 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
FOXR1Q6PIV2 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.9□□□□□ -1.15
FOXR1Q6PIV2 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC7.89□□□□□ -1.15
FOXR1Q6PIV2 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
FOXR1Q6PIV2 AL022334.1-201ENST00000417397 1726 ntBASIC7.89□□□□□ -1.15
FOXR1Q6PIV2 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
FOXR1Q6PIV2 AL596244.1-201ENST00000567068 3779 ntBASIC7.89□□□□□ -1.15
FOXR1Q6PIV2 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
FOXR1Q6PIV2 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
FOXR1Q6PIV2 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
FOXR1Q6PIV2 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
FOXR1Q6PIV2 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.89□□□□□ -1.15
FOXR1Q6PIV2 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC7.89□□□□□ -1.15
FOXR1Q6PIV2 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
FOXR1Q6PIV2 AL512310.3-201ENST00000547023 1335 ntBASIC7.89□□□□□ -1.15
FOXR1Q6PIV2 AL929601.4-201ENST00000613011 1341 ntBASIC7.89□□□□□ -1.15
FOXR1Q6PIV2 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
FOXR1Q6PIV2 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
FOXR1Q6PIV2 SNORD56.4-201ENST00000363883 71 ntBASIC7.89□□□□□ -1.15
FOXR1Q6PIV2 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
FOXR1Q6PIV2 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
FOXR1Q6PIV2 FHL1-203ENST00000370676 833 ntTSL 5 BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms