Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL136116.2-201ENST00000404020 785 ntBASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 AL139805.1-201ENST00000407837 289 ntBASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 RNU2-72P-201ENST00000411175 163 ntBASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 AL356806.1-201ENST00000422524 916 ntBASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 MTCYBP32-201ENST00000427945 1084 ntBASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 AL731534.1-201ENST00000434711 269 ntBASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 AL645936.1-201ENST00000441979 518 ntBASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 AC073476.1-201ENST00000452854 407 ntBASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 RN7SL552P-201ENST00000462094 276 ntBASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 MRPS5P3-201ENST00000515577 166 ntBASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 TPM3P3-201ENST00000521343 354 ntBASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 AP005136.2-201ENST00000583253 1049 ntBASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 AP001823.1-201ENST00000604056 1003 ntBASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 AL080312.2-201ENST00000613001 630 ntBASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 AC243960.7-201ENST00000623532 707 ntBASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 AC104820.1-201ENST00000624183 307 ntBASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 AC022919.1-201ENST00000624979 626 ntBASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 AC119674.1-202ENST00000641333 1860 ntBASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 AC022325.1-201ENST00000502748 2199 ntBASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 SNX18P3-202ENST00000565670 1750 ntBASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 MAPK10-270ENST00000641102 3538 ntBASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 AC022164.1-201ENST00000568767 2673 ntBASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 FUNDC2P3-201ENST00000334716 533 ntBASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 SNORA77.2-201ENST00000408571 112 ntBASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 RN7SKP146-201ENST00000410242 334 ntBASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 NFYAP1-201ENST00000431953 972 ntBASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 RPL23AP60-201ENST00000450011 454 ntBASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 RPL37AP8-201ENST00000494116 276 ntBASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 SNX18P25-201ENST00000510539 758 ntBASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 AC090958.1-201ENST00000511122 351 ntBASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 HMGN1P17-201ENST00000513734 295 ntBASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 ARGFXP2-201ENST00000579304 949 ntBASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 MIR4760-201ENST00000585040 80 ntBASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 WBP1LP11-201ENST00000586141 328 ntBASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 AC005479.3-201ENST00000602790 431 ntBASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 SMIM12P1-201ENST00000603004 274 ntBASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 BNIP3P7-201ENST00000605641 516 ntBASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 AL669831.5-218ENST00000591702 1873 ntBASIC6.05□□□□□ -1.44
ZNF549Q6P9A3 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms