Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RPL21P32-201ENST00000419877 477 ntBASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 PIGX-204ENST00000421265 677 ntTSL 2 BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 AP000997.1-201ENST00000424313 479 ntTSL 3 BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 RPSAP32-201ENST00000432681 526 ntBASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 BTF3P10-201ENST00000433415 495 ntBASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 MTCYBP34-201ENST00000439552 670 ntBASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 AL136454.1-201ENST00000443181 466 ntBASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 MED28P7-201ENST00000456611 530 ntBASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 ST13P14-201ENST00000474095 734 ntBASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 RBM43P1-201ENST00000476891 1081 ntBASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 RPL9P6-201ENST00000492764 598 ntBASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 AC112198.1-201ENST00000505369 1220 ntBASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 GUSBP9-201ENST00000510138 584 ntBASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 IMPA1P1-201ENST00000510718 842 ntBASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 AC068134.3-201ENST00000513620 788 ntBASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 DEFB108A-201ENST00000530110 222 ntBASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 SYPL1P2-201ENST00000582878 727 ntBASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 AC015688.2-201ENST00000584523 262 ntBASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 AL442067.2-201ENST00000614033 363 ntBASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 AC211433.3-201ENST00000623770 375 ntBASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 RPSAP68-201ENST00000625020 438 ntBASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 AL356317.1-201ENST00000396110 1436 ntBASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 AC004014.2-201ENST00000623718 5122 ntBASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 DDX10P2-201ENST00000417796 2614 ntBASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RSPO4Q2I0M5 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 TREML2-201ENST00000483722 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 TRIM53BP-201ENST00000532912 1720 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 FAM3C2-201ENST00000312214 681 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 RNU6-157P-201ENST00000383957 107 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 RNU6-259P-201ENST00000383999 107 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 Y_RNA.548-201ENST00000384656 105 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 MIR181A1-201ENST00000385026 110 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 MT-TL1-201ENST00000386347 75 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 RN7SKP127-201ENST00000410443 354 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 RN7SKP86-201ENST00000410454 332 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 VN1R42P-201ENST00000424651 344 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 DEFB130D-201ENST00000426866 237 ntBASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC7.24□□□□□ -1.25
RSPO4Q2I0M5 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms