Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HIST1H3AP68431 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HIST1H3AP68431 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HIST1H3AP68431 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
HIST1H3AP68431 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HIST1H3AP68431 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HIST1H3AP68431 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HIST1H3AP68431 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.3□□□□□ -1.56
HIST1H3AP68431 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
HIST1H3AP68431 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H3AP68431 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.29□□□□□ -1.56
HIST1H3AP68431 AL078595.2-201ENST00000605309 1780 ntBASIC5.29□□□□□ -1.56
HIST1H3AP68431 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H3AP68431 THAP12P9-201ENST00000503971 2360 ntBASIC5.29□□□□□ -1.56
HIST1H3AP68431 AL049634.1-201ENST00000453770 1720 ntBASIC5.29□□□□□ -1.56
HIST1H3AP68431 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H3AP68431 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.29□□□□□ -1.56
HIST1H3AP68431 AC232271.1-201ENST00000602455 2715 ntBASIC5.29□□□□□ -1.56
HIST1H3AP68431 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H3AP68431 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.29□□□□□ -1.56
HIST1H3AP68431 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
HIST1H3AP68431 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HIST1H3AP68431 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H3AP68431 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H3AP68431 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H3AP68431 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H3AP68431 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H3AP68431 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H3AP68431 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
HIST1H3AP68431 RN7SKP250-201ENST00000363924 321 ntBASIC5.29□□□□□ -1.56
HIST1H3AP68431 AC245096.1-201ENST00000413104 546 ntBASIC5.29□□□□□ -1.56
HIST1H3AP68431 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.29□□□□□ -1.56
HIST1H3AP68431 RPL12P12-201ENST00000424633 501 ntBASIC5.29□□□□□ -1.56
HIST1H3AP68431 MRPS21P2-201ENST00000424704 264 ntBASIC5.29□□□□□ -1.56
HIST1H3AP68431 RPSAP65-201ENST00000429660 595 ntBASIC5.29□□□□□ -1.56
HIST1H3AP68431 PSMD10P2-201ENST00000432890 672 ntBASIC5.29□□□□□ -1.56
HIST1H3AP68431 BX679664.2-201ENST00000439282 283 ntBASIC5.29□□□□□ -1.56
HIST1H3AP68431 SEPT14P12-201ENST00000442280 560 ntBASIC5.29□□□□□ -1.56
HIST1H3AP68431 TRIM60P16-201ENST00000444048 694 ntBASIC5.29□□□□□ -1.56
HIST1H3AP68431 AC010240.2-201ENST00000445363 1205 ntBASIC5.29□□□□□ -1.56
HIST1H3AP68431 ZNF619P1-201ENST00000446539 752 ntBASIC5.29□□□□□ -1.56
HIST1H3AP68431 SDC4P-201ENST00000453285 601 ntBASIC5.29□□□□□ -1.56
HIST1H3AP68431 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.29□□□□□ -1.56
HIST1H3AP68431 AC124945.1-201ENST00000485133 188 ntBASIC5.29□□□□□ -1.56
HIST1H3AP68431 RN7SL568P-201ENST00000493069 298 ntBASIC5.29□□□□□ -1.56
HIST1H3AP68431 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.29□□□□□ -1.56
HIST1H3AP68431 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.29□□□□□ -1.56
HIST1H3AP68431 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H3AP68431 BTG1P1-201ENST00000540396 508 ntBASIC5.29□□□□□ -1.56
HIST1H3AP68431 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H3AP68431 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H3AP68431 BMS1P16-201ENST00000556075 1147 ntBASIC5.29□□□□□ -1.56
HIST1H3AP68431 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.29□□□□□ -1.56
HIST1H3AP68431 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.29□□□□□ -1.56
HIST1H3AP68431 RN7SL230P-201ENST00000580835 303 ntBASIC5.29□□□□□ -1.56
HIST1H3AP68431 AC011500.1-201ENST00000601963 469 ntBASIC5.29□□□□□ -1.56
HIST1H3AP68431 AL645933.2-201ENST00000606743 1207 ntBASIC5.29□□□□□ -1.56
HIST1H3AP68431 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.29□□□□□ -1.56
HIST1H3AP68431 AL136097.3-201ENST00000611097 505 ntBASIC5.29□□□□□ -1.56
HIST1H3AP68431 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.29□□□□□ -1.56
HIST1H3AP68431 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H3AP68431 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
HIST1H3AP68431 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H3AP68431 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
HIST1H3AP68431 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.29□□□□□ -1.56
HIST1H3AP68431 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.29□□□□□ -1.56
HIST1H3AP68431 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HIST1H3AP68431 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.29□□□□□ -1.56
HIST1H3AP68431 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.29□□□□□ -1.56
HIST1H3AP68431 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.29□□□□□ -1.56
HIST1H3AP68431 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HIST1H3AP68431 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.28□□□□□ -1.56
HIST1H3AP68431 AC119674.1-202ENST00000641333 1860 ntBASIC5.28□□□□□ -1.56
HIST1H3AP68431 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HIST1H3AP68431 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HIST1H3AP68431 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HIST1H3AP68431 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HIST1H3AP68431 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HIST1H3AP68431 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.28□□□□□ -1.56
HIST1H3AP68431 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.28□□□□□ -1.56
HIST1H3AP68431 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HIST1H3AP68431 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HIST1H3AP68431 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HIST1H3AP68431 YWHAZP6-201ENST00000399764 738 ntBASIC5.28□□□□□ -1.56
HIST1H3AP68431 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.28□□□□□ -1.56
HIST1H3AP68431 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.28□□□□□ -1.56
HIST1H3AP68431 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.28□□□□□ -1.56
HIST1H3AP68431 RPS7P8-201ENST00000418311 581 ntBASIC5.28□□□□□ -1.56
HIST1H3AP68431 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.28□□□□□ -1.56
HIST1H3AP68431 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.28□□□□□ -1.56
HIST1H3AP68431 RPSAP32-201ENST00000432681 526 ntBASIC5.28□□□□□ -1.56
HIST1H3AP68431 GAPDHP59-201ENST00000435908 267 ntBASIC5.28□□□□□ -1.56
HIST1H3AP68431 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.28□□□□□ -1.56
HIST1H3AP68431 RPL29P23-201ENST00000486188 442 ntBASIC5.28□□□□□ -1.56
HIST1H3AP68431 AP002453.1-201ENST00000492327 668 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms