Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.91□□□□□ -1.46
CLDN6P56747 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.91□□□□□ -1.46
CLDN6P56747 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC5.91□□□□□ -1.46
CLDN6P56747 VN1R38P-201ENST00000450265 887 ntBASIC5.91□□□□□ -1.46
CLDN6P56747 AL445665.1-202ENST00000452436 324 ntBASIC5.91□□□□□ -1.46
CLDN6P56747 SNX18P26-201ENST00000458433 740 ntBASIC5.91□□□□□ -1.46
CLDN6P56747 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.91□□□□□ -1.46
CLDN6P56747 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.91□□□□□ -1.46
CLDN6P56747 AP006245.2-201ENST00000522004 300 ntBASIC5.91□□□□□ -1.46
CLDN6P56747 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.91□□□□□ -1.46
CLDN6P56747 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.91□□□□□ -1.46
CLDN6P56747 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.91□□□□□ -1.46
CLDN6P56747 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.91□□□□□ -1.46
CLDN6P56747 MIR1273E-201ENST00000581165 102 ntBASIC5.91□□□□□ -1.46
CLDN6P56747 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.91□□□□□ -1.46
CLDN6P56747 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.91□□□□□ -1.46
CLDN6P56747 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CLDN6P56747 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.91□□□□□ -1.46
CLDN6P56747 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.91□□□□□ -1.46
CLDN6P56747 OR8G3P-202ENST00000641572 1255 ntBASIC5.91□□□□□ -1.46
CLDN6P56747 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.91□□□□□ -1.46
CLDN6P56747 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLDN6P56747 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.91□□□□□ -1.46
CLDN6P56747 CDY3P-201ENST00000454543 1618 ntBASIC5.91□□□□□ -1.46
CLDN6P56747 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.91□□□□□ -1.46
CLDN6P56747 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CLDN6P56747 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CLDN6P56747 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
CLDN6P56747 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CLDN6P56747 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.91□□□□□ -1.46
CLDN6P56747 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CLDN6P56747 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.9□□□□□ -1.46
CLDN6P56747 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLDN6P56747 AC024587.1-201ENST00000505925 2157 ntBASIC5.9□□□□□ -1.46
CLDN6P56747 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLDN6P56747 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.9□□□□□ -1.46
CLDN6P56747 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.9□□□□□ -1.46
CLDN6P56747 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.9□□□□□ -1.46
CLDN6P56747 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC5.9□□□□□ -1.46
CLDN6P56747 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLDN6P56747 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CLDN6P56747 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.9□□□□□ -1.46
CLDN6P56747 RNA5SP333-201ENST00000363466 118 ntBASIC5.9□□□□□ -1.46
CLDN6P56747 RNA5SP334-201ENST00000364825 118 ntBASIC5.9□□□□□ -1.46
CLDN6P56747 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.9□□□□□ -1.46
CLDN6P56747 DPPA2P3-201ENST00000411853 655 ntBASIC5.9□□□□□ -1.46
CLDN6P56747 GAPDHP75-201ENST00000433910 943 ntBASIC5.9□□□□□ -1.46
CLDN6P56747 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.9□□□□□ -1.46
CLDN6P56747 VN1R110P-201ENST00000438988 971 ntBASIC5.9□□□□□ -1.46
CLDN6P56747 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.9□□□□□ -1.46
CLDN6P56747 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.9□□□□□ -1.46
CLDN6P56747 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.9□□□□□ -1.46
CLDN6P56747 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.9□□□□□ -1.46
CLDN6P56747 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.9□□□□□ -1.46
CLDN6P56747 AC091965.3-201ENST00000506236 208 ntBASIC5.9□□□□□ -1.46
CLDN6P56747 TMEM97P2-201ENST00000517841 403 ntBASIC5.9□□□□□ -1.46
CLDN6P56747 IGKV1D-22-201ENST00000518953 324 ntBASIC5.9□□□□□ -1.46
CLDN6P56747 WBP1LP3-201ENST00000523033 208 ntBASIC5.9□□□□□ -1.46
CLDN6P56747 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.9□□□□□ -1.46
CLDN6P56747 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.9□□□□□ -1.46
CLDN6P56747 MIR4776-2-201ENST00000580204 80 ntBASIC5.9□□□□□ -1.46
CLDN6P56747 AC005244.1-201ENST00000582566 339 ntBASIC5.9□□□□□ -1.46
CLDN6P56747 AC233702.7-202ENST00000582941 211 ntBASIC5.9□□□□□ -1.46
CLDN6P56747 AC067852.5-201ENST00000589299 310 ntBASIC5.9□□□□□ -1.46
CLDN6P56747 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLDN6P56747 AC211433.2-201ENST00000608433 387 ntBASIC5.9□□□□□ -1.46
CLDN6P56747 AC069234.4-201ENST00000621276 412 ntBASIC5.9□□□□□ -1.46
CLDN6P56747 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CLDN6P56747 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CLDN6P56747 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CLDN6P56747 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CLDN6P56747 TMEM75-201ENST00000624314 2165 ntBASIC5.9□□□□□ -1.47
CLDN6P56747 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
CLDN6P56747 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC5.9□□□□□ -1.47
CLDN6P56747 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CLDN6P56747 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.9□□□□□ -1.47
CLDN6P56747 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CLDN6P56747 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CLDN6P56747 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CLDN6P56747 AL391261.1-201ENST00000555712 1479 ntBASIC5.9□□□□□ -1.47
CLDN6P56747 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN6P56747 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.89□□□□□ -1.47
CLDN6P56747 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.89□□□□□ -1.47
CLDN6P56747 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN6P56747 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN6P56747 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN6P56747 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN6P56747 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CLDN6P56747 TNPO1P2-201ENST00000426249 2665 ntBASIC5.89□□□□□ -1.47
CLDN6P56747 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN6P56747 NPM1P36-201ENST00000415681 835 ntBASIC5.89□□□□□ -1.47
CLDN6P56747 RPS7P8-201ENST00000418311 581 ntBASIC5.89□□□□□ -1.47
CLDN6P56747 NPM1P22-201ENST00000427761 952 ntBASIC5.89□□□□□ -1.47
CLDN6P56747 RPS27AP2-201ENST00000457576 465 ntBASIC5.89□□□□□ -1.47
CLDN6P56747 UBA52P7-201ENST00000486088 380 ntBASIC5.89□□□□□ -1.47
CLDN6P56747 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN6P56747 AC106800.3-201ENST00000511389 308 ntBASIC5.89□□□□□ -1.47
CLDN6P56747 SETP21-201ENST00000514799 892 ntBASIC5.89□□□□□ -1.47
CLDN6P56747 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN6P56747 IGLV3-6-201ENST00000523937 250 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms