Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC087565.3-203ENST00000641018 837 ntBASIC6.93□□□□□ -1.3
HMGCS2P54868 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.93□□□□□ -1.3
HMGCS2P54868 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.93□□□□□ -1.3
HMGCS2P54868 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HMGCS2P54868 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HMGCS2P54868 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
HMGCS2P54868 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
HMGCS2P54868 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HMGCS2P54868 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGCS2P54868 AL731556.1-201ENST00000394628 3711 ntBASIC6.92□□□□□ -1.3
HMGCS2P54868 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMGCS2P54868 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGCS2P54868 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMGCS2P54868 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGCS2P54868 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.92□□□□□ -1.3
HMGCS2P54868 AL033543.1-201ENST00000623440 13454 ntBASIC6.92□□□□□ -1.3
HMGCS2P54868 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMGCS2P54868 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
HMGCS2P54868 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.92□□□□□ -1.3
HMGCS2P54868 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.92□□□□□ -1.3
HMGCS2P54868 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.92□□□□□ -1.3
HMGCS2P54868 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.92□□□□□ -1.3
HMGCS2P54868 AC026348.1-201ENST00000462549 1053 ntBASIC6.92□□□□□ -1.3
HMGCS2P54868 DUTP7-201ENST00000507982 486 ntBASIC6.92□□□□□ -1.3
HMGCS2P54868 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC6.92□□□□□ -1.3
HMGCS2P54868 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.92□□□□□ -1.3
HMGCS2P54868 AC119403.2-201ENST00000590960 598 ntBASIC6.92□□□□□ -1.3
HMGCS2P54868 RN7SL544P-201ENST00000617232 284 ntBASIC6.92□□□□□ -1.3
HMGCS2P54868 RN7SL763P-201ENST00000620922 284 ntBASIC6.92□□□□□ -1.3
HMGCS2P54868 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC6.92□□□□□ -1.3
HMGCS2P54868 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.92□□□□□ -1.3
HMGCS2P54868 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
HMGCS2P54868 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
HMGCS2P54868 AC027279.4-201ENST00000624371 2072 ntBASIC6.92□□□□□ -1.3
HMGCS2P54868 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMGCS2P54868 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.92□□□□□ -1.3
HMGCS2P54868 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMGCS2P54868 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGCS2P54868 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGCS2P54868 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
HMGCS2P54868 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
HMGCS2P54868 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
HMGCS2P54868 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGCS2P54868 NCOA4P3-201ENST00000513203 1877 ntBASIC6.92□□□□□ -1.3
HMGCS2P54868 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.92□□□□□ -1.3
HMGCS2P54868 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGCS2P54868 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HMGCS2P54868 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
HMGCS2P54868 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC6.91□□□□□ -1.3
HMGCS2P54868 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HMGCS2P54868 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
HMGCS2P54868 AC007114.2-201ENST00000576014 4281 ntBASIC6.91□□□□□ -1.3
HMGCS2P54868 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.91□□□□□ -1.3
HMGCS2P54868 BMS1P17-202ENST00000416720 316 ntBASIC6.91□□□□□ -1.3
HMGCS2P54868 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.91□□□□□ -1.3
HMGCS2P54868 AL355433.1-201ENST00000422804 300 ntBASIC6.91□□□□□ -1.3
HMGCS2P54868 RPL23AP60-201ENST00000450011 454 ntBASIC6.91□□□□□ -1.3
HMGCS2P54868 LRRC37A14P-201ENST00000452297 462 ntBASIC6.91□□□□□ -1.3
HMGCS2P54868 AC112187.1-201ENST00000455837 479 ntBASIC6.91□□□□□ -1.3
HMGCS2P54868 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.91□□□□□ -1.3
HMGCS2P54868 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.91□□□□□ -1.3
HMGCS2P54868 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
HMGCS2P54868 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.91□□□□□ -1.3
HMGCS2P54868 AC079395.2-201ENST00000610982 737 ntBASIC6.91□□□□□ -1.3
HMGCS2P54868 uc_338.26-201ENST00000612659 160 ntBASIC6.91□□□□□ -1.3
HMGCS2P54868 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.91□□□□□ -1.3
HMGCS2P54868 AL445670.1-201ENST00000618889 801 ntBASIC6.91□□□□□ -1.3
HMGCS2P54868 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.91□□□□□ -1.3
HMGCS2P54868 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.91□□□□□ -1.3
HMGCS2P54868 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HMGCS2P54868 CCNT2P1-201ENST00000423082 1315 ntBASIC6.91□□□□□ -1.3
HMGCS2P54868 AL359922.2-201ENST00000581788 3017 ntBASIC6.91□□□□□ -1.3
HMGCS2P54868 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HMGCS2P54868 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HMGCS2P54868 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
HMGCS2P54868 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.91□□□□□ -1.3
HMGCS2P54868 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HMGCS2P54868 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HMGCS2P54868 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.91□□□□□ -1.3
HMGCS2P54868 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.91□□□□□ -1.3
HMGCS2P54868 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HMGCS2P54868 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HMGCS2P54868 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
HMGCS2P54868 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
HMGCS2P54868 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HMGCS2P54868 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.9□□□□□ -1.3
HMGCS2P54868 AC005618.1-201ENST00000606901 3148 ntBASIC6.9□□□□□ -1.3
HMGCS2P54868 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.9□□□□□ -1.3
HMGCS2P54868 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HMGCS2P54868 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HMGCS2P54868 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.9□□□□□ -1.3
HMGCS2P54868 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.9□□□□□ -1.3
HMGCS2P54868 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.9□□□□□ -1.3
HMGCS2P54868 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
HMGCS2P54868 OR9K1P-201ENST00000326513 941 ntBASIC6.9□□□□□ -1.3
HMGCS2P54868 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.9□□□□□ -1.3
HMGCS2P54868 RN7SKP29-201ENST00000410957 272 ntBASIC6.9□□□□□ -1.3
HMGCS2P54868 HMGB3P24-201ENST00000433260 622 ntBASIC6.9□□□□□ -1.3
HMGCS2P54868 OR13K1P-201ENST00000444577 975 ntBASIC6.9□□□□□ -1.3
HMGCS2P54868 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms