Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AP002784.2-201ENST00000397300 549 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 CXADRP1-201ENST00000398098 1095 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 PSMA6P1-201ENST00000400275 741 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 PRELID1P1-201ENST00000403549 660 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.02□□□□□ -1.29
EPHB3P54753 BX664727.1-201ENST00000416024 466 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 TRGV6-201ENST00000417928 299 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 AL360013.1-201ENST00000419031 858 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.02□□□□□ -1.29
EPHB3P54753 USP9YP24-201ENST00000434374 697 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 SOCS5P1-201ENST00000440415 949 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 MTCO1P53-201ENST00000441633 699 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 AC007000.2-201ENST00000442564 487 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 GAPDHP33-201ENST00000443168 1013 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 USP9YP17-201ENST00000444617 696 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
EPHB3P54753 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC7.02□□□□□ -1.29
EPHB3P54753 NAP1L1P3-201ENST00000462291 880 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC7.02□□□□□ -1.29
EPHB3P54753 AC118282.2-201ENST00000508739 374 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 AC011352.2-201ENST00000514574 1016 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 RN7SKP70-201ENST00000516655 271 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.02□□□□□ -1.29
EPHB3P54753 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.02□□□□□ -1.29
EPHB3P54753 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC7.02□□□□□ -1.29
EPHB3P54753 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.02□□□□□ -1.29
EPHB3P54753 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.02□□□□□ -1.29
EPHB3P54753 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC7.02□□□□□ -1.29
EPHB3P54753 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.02□□□□□ -1.29
EPHB3P54753 AC135626.1-201ENST00000556983 435 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 MTCYBP23-201ENST00000558717 1102 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
EPHB3P54753 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC7.02□□□□□ -1.29
EPHB3P54753 SYPL1P2-201ENST00000582878 727 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 AC063977.7-201ENST00000594454 337 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.02□□□□□ -1.29
EPHB3P54753 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.02□□□□□ -1.29
EPHB3P54753 AC245052.7-201ENST00000601161 359 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 AC025588.2-201ENST00000604851 466 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 AC093635.1-201ENST00000609028 555 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 AC091768.1-201ENST00000609258 930 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC7.02□□□□□ -1.29
EPHB3P54753 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 CXADRP3-202ENST00000617265 1100 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 AC123767.1-202ENST00000620407 817 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 AC098679.5-201ENST00000624394 571 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.02□□□□□ -1.29
EPHB3P54753 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC7.02□□□□□ -1.29
EPHB3P54753 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.02□□□□□ -1.29
EPHB3P54753 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.02□□□□□ -1.29
EPHB3P54753 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
EPHB3P54753 FLJ42393-201ENST00000623801 2270 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
EPHB3P54753 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
EPHB3P54753 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
EPHB3P54753 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
EPHB3P54753 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.02□□□□□ -1.29
EPHB3P54753 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
EPHB3P54753 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
EPHB3P54753 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.01□□□□□ -1.29
EPHB3P54753 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
EPHB3P54753 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
EPHB3P54753 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.01□□□□□ -1.29
EPHB3P54753 AP003486.1-201ENST00000525716 3994 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
EPHB3P54753 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
EPHB3P54753 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
EPHB3P54753 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.01□□□□□ -1.29
EPHB3P54753 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
EPHB3P54753 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
EPHB3P54753 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
EPHB3P54753 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
EPHB3P54753 AC138915.4-201ENST00000565549 4147 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
EPHB3P54753 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
EPHB3P54753 RNA5SP232-201ENST00000364144 119 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.01□□□□□ -1.29
EPHB3P54753 RN7SKP86-201ENST00000410454 332 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 BTF3L4P1-201ENST00000413813 468 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC7.01□□□□□ -1.29
EPHB3P54753 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC7.01□□□□□ -1.29
EPHB3P54753 MTND4LP11-201ENST00000422184 280 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 PTP4A1P7-201ENST00000423476 514 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 MTND4LP13-201ENST00000425022 298 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 AL031667.1-201ENST00000440222 725 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 CRYGGP-201ENST00000443337 145 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 AL096829.2-201ENST00000446582 742 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
EPHB3P54753 AC093719.1-201ENST00000480427 441 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.01□□□□□ -1.29
EPHB3P54753 AC109927.2-201ENST00000506416 303 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC7.01□□□□□ -1.29
EPHB3P54753 MTCYBP16-201ENST00000509187 1129 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 MTCYBP37-201ENST00000510642 1133 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
EPHB3P54753 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
EPHB3P54753 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms