Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC009729.1-201ENST00000548873 1133 ntBASIC6.58□□□□□ -1.36
SSR1P43307 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.58□□□□□ -1.36
SSR1P43307 MIR212-201ENST00000586026 110 ntBASIC6.58□□□□□ -1.36
SSR1P43307 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.58□□□□□ -1.36
SSR1P43307 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.58□□□□□ -1.36
SSR1P43307 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
SSR1P43307 GAPDHP41-201ENST00000613707 975 ntBASIC6.58□□□□□ -1.36
SSR1P43307 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.58□□□□□ -1.36
SSR1P43307 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.58□□□□□ -1.36
SSR1P43307 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SSR1P43307 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.58□□□□□ -1.36
SSR1P43307 OR7E91P-202ENST00000642062 1198 ntBASIC6.58□□□□□ -1.36
SSR1P43307 LYARP1-201ENST00000436977 1501 ntBASIC6.58□□□□□ -1.36
SSR1P43307 AL078621.3-201ENST00000623707 2042 ntBASIC6.58□□□□□ -1.36
SSR1P43307 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSR1P43307 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SSR1P43307 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SSR1P43307 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.58□□□□□ -1.36
SSR1P43307 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSR1P43307 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SSR1P43307 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SSR1P43307 AC239868.2-201ENST00000564237 4527 ntBASIC6.57□□□□□ -1.36
SSR1P43307 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.57□□□□□ -1.36
SSR1P43307 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.57□□□□□ -1.36
SSR1P43307 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.57□□□□□ -1.36
SSR1P43307 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSR1P43307 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.57□□□□□ -1.36
SSR1P43307 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSR1P43307 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.57□□□□□ -1.36
SSR1P43307 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSR1P43307 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSR1P43307 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
SSR1P43307 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSR1P43307 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSR1P43307 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SSR1P43307 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSR1P43307 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SSR1P43307 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SSR1P43307 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.57□□□□□ -1.36
SSR1P43307 SNORD94-201ENST00000386037 137 ntBASIC6.57□□□□□ -1.36
SSR1P43307 YWHAZP4-201ENST00000392459 708 ntBASIC6.57□□□□□ -1.36
SSR1P43307 RN7SKP129-201ENST00000410288 299 ntBASIC6.57□□□□□ -1.36
SSR1P43307 AC007562.1-201ENST00000421819 517 ntBASIC6.57□□□□□ -1.36
SSR1P43307 RPSAP65-201ENST00000429660 595 ntBASIC6.57□□□□□ -1.36
SSR1P43307 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.57□□□□□ -1.36
SSR1P43307 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.57□□□□□ -1.36
SSR1P43307 AC092601.1-201ENST00000444526 383 ntBASIC6.57□□□□□ -1.36
SSR1P43307 AC023274.2-201ENST00000445264 521 ntBASIC6.57□□□□□ -1.36
SSR1P43307 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC6.57□□□□□ -1.36
SSR1P43307 AC073594.1-201ENST00000462065 364 ntBASIC6.57□□□□□ -1.36
SSR1P43307 RN7SL39P-201ENST00000462264 297 ntBASIC6.57□□□□□ -1.36
SSR1P43307 AC090589.1-201ENST00000473109 362 ntBASIC6.57□□□□□ -1.36
SSR1P43307 RN7SL369P-201ENST00000477138 299 ntBASIC6.57□□□□□ -1.36
SSR1P43307 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.57□□□□□ -1.36
SSR1P43307 AC105420.1-201ENST00000504389 582 ntBASIC6.57□□□□□ -1.36
SSR1P43307 AP000859.1-201ENST00000525536 307 ntBASIC6.57□□□□□ -1.36
SSR1P43307 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSR1P43307 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.57□□□□□ -1.36
SSR1P43307 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.57□□□□□ -1.36
SSR1P43307 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.57□□□□□ -1.36
SSR1P43307 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.57□□□□□ -1.36
SSR1P43307 U91328.4-201ENST00000608919 517 ntBASIC6.57□□□□□ -1.36
SSR1P43307 AC068726.1-201ENST00000610993 341 ntBASIC6.57□□□□□ -1.36
SSR1P43307 AC024884.1-201ENST00000620583 399 ntBASIC6.57□□□□□ -1.36
SSR1P43307 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSR1P43307 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSR1P43307 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.57□□□□□ -1.36
SSR1P43307 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSR1P43307 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSR1P43307 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.56□□□□□ -1.36
SSR1P43307 CDC27P2-201ENST00000425026 1922 ntBASIC6.56□□□□□ -1.36
SSR1P43307 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
SSR1P43307 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.56□□□□□ -1.36
SSR1P43307 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSR1P43307 AL136984.1-201ENST00000607611 1893 ntBASIC6.56□□□□□ -1.36
SSR1P43307 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSR1P43307 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSR1P43307 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.56□□□□□ -1.36
SSR1P43307 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSR1P43307 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SSR1P43307 HMGA1P8-201ENST00000414130 321 ntBASIC6.56□□□□□ -1.36
SSR1P43307 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.56□□□□□ -1.36
SSR1P43307 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.56□□□□□ -1.36
SSR1P43307 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.56□□□□□ -1.36
SSR1P43307 OR6R1P-201ENST00000431838 940 ntBASIC6.56□□□□□ -1.36
SSR1P43307 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.56□□□□□ -1.36
SSR1P43307 AP003385.3-201ENST00000472498 287 ntBASIC6.56□□□□□ -1.36
SSR1P43307 RPS4XP17-201ENST00000479057 754 ntBASIC6.56□□□□□ -1.36
SSR1P43307 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.56□□□□□ -1.36
SSR1P43307 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.56□□□□□ -1.36
SSR1P43307 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.56□□□□□ -1.36
SSR1P43307 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.56□□□□□ -1.36
SSR1P43307 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.56□□□□□ -1.36
SSR1P43307 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.56□□□□□ -1.36
SSR1P43307 AL390334.1-201ENST00000556395 450 ntBASIC6.56□□□□□ -1.36
SSR1P43307 AC007494.1-201ENST00000562293 760 ntBASIC6.56□□□□□ -1.36
SSR1P43307 MIR3189-201ENST00000578735 73 ntBASIC6.56□□□□□ -1.36
SSR1P43307 AC027229.1-201ENST00000583887 253 ntBASIC6.56□□□□□ -1.36
SSR1P43307 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.56□□□□□ -1.36
SSR1P43307 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms