Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
CPS1P31327 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CPS1P31327 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
CPS1P31327 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC8.4□□□□□ -1.07
CPS1P31327 FO082842.1-201ENST00000423552 1370 ntBASIC8.4□□□□□ -1.07
CPS1P31327 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
CPS1P31327 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC8.4□□□□□ -1.07
CPS1P31327 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CPS1P31327 U3.2-201ENST00000362981 210 ntBASIC8.39□□□□□ -1.07
CPS1P31327 RNU1-106P-201ENST00000384382 164 ntBASIC8.39□□□□□ -1.07
CPS1P31327 MIR640-201ENST00000385086 96 ntBASIC8.39□□□□□ -1.07
CPS1P31327 OR52B5P-201ENST00000435337 951 ntBASIC8.39□□□□□ -1.07
CPS1P31327 CYCSP12-201ENST00000437729 300 ntBASIC8.39□□□□□ -1.07
CPS1P31327 OARD1-211ENST00000480585 829 ntTSL 3 BASIC8.39□□□□□ -1.07
CPS1P31327 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC8.39□□□□□ -1.07
CPS1P31327 AC021146.10-201ENST00000515628 706 ntBASIC8.39□□□□□ -1.07
CPS1P31327 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC8.39□□□□□ -1.07
CPS1P31327 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC8.39□□□□□ -1.07
CPS1P31327 AL021368.3-201ENST00000607119 578 ntBASIC8.39□□□□□ -1.07
CPS1P31327 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC8.39□□□□□ -1.07
CPS1P31327 OR52B5P-202ENST00000641118 1110 ntBASIC8.39□□□□□ -1.07
CPS1P31327 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC8.39□□□□□ -1.07
CPS1P31327 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CPS1P31327 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CPS1P31327 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CPS1P31327 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC8.39□□□□□ -1.07
CPS1P31327 AP002364.1-201ENST00000623330 3386 ntBASIC8.39□□□□□ -1.07
CPS1P31327 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CPS1P31327 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
CPS1P31327 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC8.39□□□□□ -1.07
CPS1P31327 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CPS1P31327 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CPS1P31327 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
CPS1P31327 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC8.39□□□□□ -1.07
CPS1P31327 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
CPS1P31327 AL359976.1-201ENST00000418655 3528 ntBASIC8.39□□□□□ -1.07
CPS1P31327 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CPS1P31327 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC8.39□□□□□ -1.07
CPS1P31327 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CPS1P31327 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
CPS1P31327 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CPS1P31327 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC8.39□□□□□ -1.07
CPS1P31327 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
CPS1P31327 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC8.39□□□□□ -1.07
CPS1P31327 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
CPS1P31327 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
CPS1P31327 RN7SKP166-201ENST00000410812 305 ntBASIC8.39□□□□□ -1.07
CPS1P31327 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CPS1P31327 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC8.39□□□□□ -1.07
CPS1P31327 AC005297.1-201ENST00000444765 862 ntBASIC8.39□□□□□ -1.07
CPS1P31327 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
CPS1P31327 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC8.39□□□□□ -1.07
CPS1P31327 AC008629.2-201ENST00000503783 483 ntBASIC8.39□□□□□ -1.07
CPS1P31327 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC8.39□□□□□ -1.07
CPS1P31327 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CPS1P31327 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC8.39□□□□□ -1.07
CPS1P31327 AC018552.1-201ENST00000562099 811 ntBASIC8.39□□□□□ -1.07
CPS1P31327 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CPS1P31327 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CPS1P31327 SALL4P7-201ENST00000555779 3120 ntBASIC8.38□□□□□ -1.07
CPS1P31327 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CPS1P31327 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CPS1P31327 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CPS1P31327 UGT2B27P-201ENST00000505092 1620 ntBASIC8.38□□□□□ -1.07
CPS1P31327 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC8.38□□□□□ -1.07
CPS1P31327 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC8.38□□□□□ -1.07
CPS1P31327 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CPS1P31327 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC8.38□□□□□ -1.07
CPS1P31327 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
CPS1P31327 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CPS1P31327 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC8.38□□□□□ -1.07
CPS1P31327 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
CPS1P31327 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CPS1P31327 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CPS1P31327 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
CPS1P31327 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
CPS1P31327 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8.38□□□□□ -1.07
CPS1P31327 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC8.38□□□□□ -1.07
CPS1P31327 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC8.38□□□□□ -1.07
CPS1P31327 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
CPS1P31327 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
CPS1P31327 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
CPS1P31327 OR10R3P-201ENST00000361688 942 ntBASIC8.38□□□□□ -1.07
CPS1P31327 RNU1-24P-201ENST00000364285 165 ntBASIC8.38□□□□□ -1.07
CPS1P31327 RNA5SP211-201ENST00000365516 117 ntBASIC8.38□□□□□ -1.07
CPS1P31327 MRPL53P1-201ENST00000414323 319 ntBASIC8.38□□□□□ -1.07
CPS1P31327 AC006466.1-201ENST00000438721 289 ntBASIC8.38□□□□□ -1.07
CPS1P31327 CUBNP2-201ENST00000443534 1139 ntBASIC8.38□□□□□ -1.07
CPS1P31327 EIF4EBP2P1-201ENST00000450009 343 ntBASIC8.38□□□□□ -1.07
CPS1P31327 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC8.38□□□□□ -1.07
CPS1P31327 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC8.38□□□□□ -1.07
CPS1P31327 MRPS16P1-201ENST00000523462 412 ntBASIC8.38□□□□□ -1.07
CPS1P31327 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CPS1P31327 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC8.38□□□□□ -1.07
CPS1P31327 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC8.38□□□□□ -1.07
CPS1P31327 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC8.38□□□□□ -1.07
CPS1P31327 AC013731.1-201ENST00000604340 883 ntBASIC8.38□□□□□ -1.07
CPS1P31327 AL022394.1-201ENST00000606979 292 ntBASIC8.38□□□□□ -1.07
CPS1P31327 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC8.38□□□□□ -1.07
CPS1P31327 AC010435.1-201ENST00000623353 1177 ntBASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms