Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 U3.25-201ENST00000391209 220 ntBASIC6.37□□□□□ -1.39
HOXA9P31269 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXA9P31269 AC093155.2-201ENST00000420734 937 ntBASIC6.37□□□□□ -1.39
HOXA9P31269 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXA9P31269 KIF4CP-201ENST00000422742 1279 ntBASIC6.37□□□□□ -1.39
HOXA9P31269 AC097721.1-201ENST00000427150 1253 ntBASIC6.37□□□□□ -1.39
HOXA9P31269 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HOXA9P31269 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXA9P31269 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXA9P31269 BMS1P10-201ENST00000443754 1120 ntBASIC6.37□□□□□ -1.39
HOXA9P31269 AL512593.1-201ENST00000444758 779 ntBASIC6.37□□□□□ -1.39
HOXA9P31269 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.37□□□□□ -1.39
HOXA9P31269 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXA9P31269 RPSAP37-201ENST00000470913 821 ntBASIC6.37□□□□□ -1.39
HOXA9P31269 RN7SL177P-201ENST00000476596 299 ntBASIC6.37□□□□□ -1.39
HOXA9P31269 AL136038.1-201ENST00000497246 351 ntBASIC6.37□□□□□ -1.39
HOXA9P31269 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HOXA9P31269 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.37□□□□□ -1.39
HOXA9P31269 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXA9P31269 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXA9P31269 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXA9P31269 OR56A7P-201ENST00000524865 941 ntBASIC6.37□□□□□ -1.39
HOXA9P31269 AC110056.1-201ENST00000525759 911 ntBASIC6.37□□□□□ -1.39
HOXA9P31269 PCNAP4-201ENST00000532690 730 ntBASIC6.37□□□□□ -1.39
HOXA9P31269 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXA9P31269 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXA9P31269 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXA9P31269 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXA9P31269 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXA9P31269 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXA9P31269 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXA9P31269 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.37□□□□□ -1.39
HOXA9P31269 AC024255.1-201ENST00000614376 102 ntBASIC6.37□□□□□ -1.39
HOXA9P31269 AC022467.1-201ENST00000614738 749 ntBASIC6.37□□□□□ -1.39
HOXA9P31269 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXA9P31269 AP005431.1-201ENST00000618479 319 ntBASIC6.37□□□□□ -1.39
HOXA9P31269 AL049767.1-202ENST00000637826 242 ntBASIC6.37□□□□□ -1.39
HOXA9P31269 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HOXA9P31269 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXA9P31269 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXA9P31269 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXA9P31269 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
HOXA9P31269 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HOXA9P31269 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA9P31269 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
HOXA9P31269 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
HOXA9P31269 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
HOXA9P31269 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA9P31269 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
HOXA9P31269 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA9P31269 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.36□□□□□ -1.39
HOXA9P31269 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA9P31269 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA9P31269 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA9P31269 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
HOXA9P31269 AL353626.3-201ENST00000413399 657 ntBASIC6.36□□□□□ -1.39
HOXA9P31269 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.36□□□□□ -1.39
HOXA9P31269 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.36□□□□□ -1.39
HOXA9P31269 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.36□□□□□ -1.39
HOXA9P31269 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.36□□□□□ -1.39
HOXA9P31269 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.36□□□□□ -1.39
HOXA9P31269 RPSAP39-201ENST00000467439 883 ntBASIC6.36□□□□□ -1.39
HOXA9P31269 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.36□□□□□ -1.39
HOXA9P31269 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA9P31269 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA9P31269 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.36□□□□□ -1.39
HOXA9P31269 AC010547.6-201ENST00000571789 193 ntBASIC6.36□□□□□ -1.39
HOXA9P31269 MIR3189-201ENST00000578735 73 ntBASIC6.36□□□□□ -1.39
HOXA9P31269 AP001496.3-201ENST00000580230 913 ntBASIC6.36□□□□□ -1.39
HOXA9P31269 SETP3-201ENST00000581726 813 ntBASIC6.36□□□□□ -1.39
HOXA9P31269 MIR3176-201ENST00000582210 90 ntBASIC6.36□□□□□ -1.39
HOXA9P31269 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA9P31269 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA9P31269 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA9P31269 OLMALINC-203ENST00000641087 3779 ntBASIC6.36□□□□□ -1.39
HOXA9P31269 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA9P31269 AL359195.2-201ENST00000623657 4412 ntBASIC6.36□□□□□ -1.39
HOXA9P31269 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA9P31269 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA9P31269 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA9P31269 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA9P31269 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA9P31269 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXA9P31269 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HOXA9P31269 BIN2P1-201ENST00000504996 1530 ntBASIC6.35□□□□□ -1.39
HOXA9P31269 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXA9P31269 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXA9P31269 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
HOXA9P31269 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXA9P31269 AL731556.1-201ENST00000394628 3711 ntBASIC6.35□□□□□ -1.39
HOXA9P31269 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HOXA9P31269 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXA9P31269 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
HOXA9P31269 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXA9P31269 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXA9P31269 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.35□□□□□ -1.39
HOXA9P31269 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXA9P31269 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXA9P31269 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXA9P31269 RPS14P4-201ENST00000415880 418 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms