Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 MTCYBP13-201ENST00000578634 1093 ntBASIC7.03□□□□□ -1.28
COL8A1P27658 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.03□□□□□ -1.28
COL8A1P27658 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC7.03□□□□□ -1.28
COL8A1P27658 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC7.03□□□□□ -1.28
COL8A1P27658 AC010487.1-201ENST00000594408 1172 ntBASIC7.03□□□□□ -1.28
COL8A1P27658 OR7E94P-202ENST00000601375 790 ntBASIC7.03□□□□□ -1.28
COL8A1P27658 OR51C1P-201ENST00000608504 942 ntBASIC7.03□□□□□ -1.28
COL8A1P27658 AC012488.1-201ENST00000611221 640 ntBASIC7.03□□□□□ -1.28
COL8A1P27658 OFCC1-217ENST00000611763 875 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
COL8A1P27658 AC002094.4-201ENST00000613598 307 ntBASIC7.03□□□□□ -1.28
COL8A1P27658 MESTIT1_2.1-201ENST00000616328 235 ntBASIC7.03□□□□□ -1.28
COL8A1P27658 OR8G7P-201ENST00000616658 848 ntBASIC7.03□□□□□ -1.28
COL8A1P27658 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC7.03□□□□□ -1.28
COL8A1P27658 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
COL8A1P27658 AC079228.1-201ENST00000624774 1049 ntBASIC7.03□□□□□ -1.28
COL8A1P27658 AC134503.1-201ENST00000633048 54 ntBASIC7.03□□□□□ -1.28
COL8A1P27658 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL8A1P27658 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL8A1P27658 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
COL8A1P27658 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL8A1P27658 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
COL8A1P27658 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.03□□□□□ -1.28
COL8A1P27658 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL8A1P27658 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL8A1P27658 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC7.03□□□□□ -1.28
COL8A1P27658 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL8A1P27658 PARP9-201ENST00000360356 3198 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL8A1P27658 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
COL8A1P27658 AC011294.1-202ENST00000451905 1947 ntTSL 2 BASIC7.03□□□□□ -1.28
COL8A1P27658 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL8A1P27658 TDP1-202ENST00000393452 2370 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL8A1P27658 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL8A1P27658 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
COL8A1P27658 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
COL8A1P27658 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL8A1P27658 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
COL8A1P27658 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC7.03□□□□□ -1.28
COL8A1P27658 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL8A1P27658 CCAT2-201ENST00000630920 1752 ntBASIC7.03□□□□□ -1.28
COL8A1P27658 LINC00547-201ENST00000612438 3314 ntTSL 2 BASIC7.02□□□□□ -1.28
COL8A1P27658 AL669831.5-218ENST00000591702 1873 ntBASIC7.02□□□□□ -1.28
COL8A1P27658 OR7E25P-202ENST00000641088 5937 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL8A1P27658 SYNE1-217ENST00000466159 2610 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL8A1P27658 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
COL8A1P27658 ST5-237ENST00000530991 3396 ntTSL 2 BASIC7.02□□□□□ -1.29
COL8A1P27658 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
COL8A1P27658 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL8A1P27658 RASSF6-203ENST00000342081 4331 ntAPPRIS P4 TSL 2 BASIC7.02□□□□□ -1.29
COL8A1P27658 RRN3-201ENST00000198767 3762 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL8A1P27658 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL8A1P27658 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL8A1P27658 IL24-202ENST00000367093 1819 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL8A1P27658 MTND5P3-201ENST00000438536 1800 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 ERCC6-208ENST00000515869 3439 ntTSL 2 BASIC7.02□□□□□ -1.29
COL8A1P27658 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL8A1P27658 RN7SKP184-201ENST00000362348 333 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 RNU1-16P-201ENST00000365477 164 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 FANK1-201ENST00000368689 522 ntTSL 3 BASIC7.02□□□□□ -1.29
COL8A1P27658 RNU6-878P-201ENST00000384578 110 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 RNU6-780P-201ENST00000391030 104 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 ISY1-202ENST00000393292 988 ntTSL 5 BASIC7.02□□□□□ -1.29
COL8A1P27658 AL034417.1-201ENST00000399343 800 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 EEF1GP6-201ENST00000402309 905 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 RPS27AP11-201ENST00000402798 447 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 KRT18P52-201ENST00000404956 846 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 RSU1P3-201ENST00000412878 835 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 AC069157.1-201ENST00000421749 137 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC7.02□□□□□ -1.29
COL8A1P27658 AC012506.4-202ENST00000430051 572 ntTSL 5 BASIC7.02□□□□□ -1.29
COL8A1P27658 PIP5K1P2-201ENST00000437005 1120 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 MTND2P29-201ENST00000438595 412 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 AC244505.5-201ENST00000443639 207 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 AL022237.1-201ENST00000446663 358 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 AC140076.1-201ENST00000449897 361 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 AL451074.1-202ENST00000453762 989 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 CST12P-201ENST00000457644 362 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 SNORD42A-201ENST00000459584 64 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 MTND1P16-201ENST00000465177 898 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 RN7SL549P-201ENST00000478997 282 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 AC096743.1-201ENST00000485172 319 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC7.02□□□□□ -1.29
COL8A1P27658 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC7.02□□□□□ -1.29
COL8A1P27658 AC104108.1-201ENST00000509930 412 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC7.02□□□□□ -1.29
COL8A1P27658 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC7.02□□□□□ -1.29
COL8A1P27658 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC7.02□□□□□ -1.29
COL8A1P27658 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC7.02□□□□□ -1.29
COL8A1P27658 LCMT1-AS1-202ENST00000563962 766 ntTSL 3 BASIC7.02□□□□□ -1.29
COL8A1P27658 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC7.02□□□□□ -1.29
COL8A1P27658 AC233699.1-201ENST00000569955 1168 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC7.02□□□□□ -1.29
COL8A1P27658 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC7.02□□□□□ -1.29
COL8A1P27658 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC7.02□□□□□ -1.29
COL8A1P27658 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC7.02□□□□□ -1.29
COL8A1P27658 RPS11-203ENST00000596873 583 ntTSL 2 BASIC7.02□□□□□ -1.29
COL8A1P27658 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC7.02□□□□□ -1.29
COL8A1P27658 AL109918.3-201ENST00000603072 338 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 VDAC1P5-201ENST00000603132 844 ntBASIC7.02□□□□□ -1.29
COL8A1P27658 AC113143.2-201ENST00000603849 394 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms