Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 MIR4505-201ENST00000582238 73 ntBASIC5.66□□□□□ -1.5
CCL4P13236 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCL4P13236 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.66□□□□□ -1.5
CCL4P13236 uc_338.26-201ENST00000612659 160 ntBASIC5.66□□□□□ -1.5
CCL4P13236 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.66□□□□□ -1.5
CCL4P13236 AC130448.2-201ENST00000624082 374 ntBASIC5.66□□□□□ -1.5
CCL4P13236 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CCL4P13236 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCL4P13236 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCL4P13236 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
CCL4P13236 XIST-206ENST00000434839 2865 ntTSL 5 BASIC5.66□□□□□ -1.5
CCL4P13236 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCL4P13236 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCL4P13236 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.66□□□□□ -1.5
CCL4P13236 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCL4P13236 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CCL4P13236 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCL4P13236 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
CCL4P13236 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCL4P13236 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CCL4P13236 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CCL4P13236 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCL4P13236 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
CCL4P13236 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC5.65□□□□□ -1.5
CCL4P13236 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.65□□□□□ -1.5
CCL4P13236 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CCL4P13236 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCL4P13236 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CCL4P13236 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCL4P13236 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.65□□□□□ -1.5
CCL4P13236 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCL4P13236 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.65□□□□□ -1.5
CCL4P13236 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCL4P13236 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CCL4P13236 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCL4P13236 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCL4P13236 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CCL4P13236 SNORA64.1-201ENST00000362600 132 ntBASIC5.65□□□□□ -1.5
CCL4P13236 RN7SKP160-201ENST00000363804 340 ntBASIC5.65□□□□□ -1.5
CCL4P13236 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCL4P13236 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCL4P13236 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.65□□□□□ -1.5
CCL4P13236 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.65□□□□□ -1.5
CCL4P13236 OR13K1P-201ENST00000444577 975 ntBASIC5.65□□□□□ -1.5
CCL4P13236 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.65□□□□□ -1.5
CCL4P13236 RPL23AP60-201ENST00000450011 454 ntBASIC5.65□□□□□ -1.5
CCL4P13236 AC112187.1-201ENST00000455837 479 ntBASIC5.65□□□□□ -1.5
CCL4P13236 AC093166.4-201ENST00000457867 318 ntBASIC5.65□□□□□ -1.5
CCL4P13236 AC104164.1-201ENST00000460282 590 ntBASIC5.65□□□□□ -1.5
CCL4P13236 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.65□□□□□ -1.5
CCL4P13236 RN7SL466P-201ENST00000497546 295 ntBASIC5.65□□□□□ -1.5
CCL4P13236 NENFP3-201ENST00000503735 313 ntBASIC5.65□□□□□ -1.5
CCL4P13236 GAPDHP71-201ENST00000511530 1003 ntBASIC5.65□□□□□ -1.5
CCL4P13236 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.65□□□□□ -1.5
CCL4P13236 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.65□□□□□ -1.5
CCL4P13236 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCL4P13236 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.65□□□□□ -1.5
CCL4P13236 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.65□□□□□ -1.5
CCL4P13236 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCL4P13236 AC016180.1-201ENST00000567945 403 ntBASIC5.65□□□□□ -1.5
CCL4P13236 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.65□□□□□ -1.5
CCL4P13236 AL691477.1-201ENST00000624398 162 ntBASIC5.65□□□□□ -1.5
CCL4P13236 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.65□□□□□ -1.5
CCL4P13236 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CCL4P13236 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCL4P13236 AC010329.1-201ENST00000593903 8328 ntBASIC5.65□□□□□ -1.51
CCL4P13236 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.65□□□□□ -1.51
CCL4P13236 RPS2P45-201ENST00000469997 2057 ntBASIC5.65□□□□□ -1.51
CCL4P13236 AL139805.2-201ENST00000455305 2433 ntBASIC5.65□□□□□ -1.51
CCL4P13236 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCL4P13236 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCL4P13236 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.65□□□□□ -1.51
CCL4P13236 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCL4P13236 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCL4P13236 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCL4P13236 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCL4P13236 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCL4P13236 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CCL4P13236 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCL4P13236 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCL4P13236 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCL4P13236 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCL4P13236 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCL4P13236 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCL4P13236 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCL4P13236 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCL4P13236 RNA5SP46-201ENST00000362370 120 ntBASIC5.64□□□□□ -1.51
CCL4P13236 RN7SKP29-201ENST00000410957 272 ntBASIC5.64□□□□□ -1.51
CCL4P13236 OR2AT2P-201ENST00000413438 905 ntBASIC5.64□□□□□ -1.51
CCL4P13236 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.64□□□□□ -1.51
CCL4P13236 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.64□□□□□ -1.51
CCL4P13236 EEF1B2P6-201ENST00000445713 673 ntBASIC5.64□□□□□ -1.51
CCL4P13236 AL022237.1-201ENST00000446663 358 ntBASIC5.64□□□□□ -1.51
CCL4P13236 AC073909.1-201ENST00000447112 999 ntBASIC5.64□□□□□ -1.51
CCL4P13236 AC103563.5-201ENST00000455643 364 ntBASIC5.64□□□□□ -1.51
CCL4P13236 RPS23P6-201ENST00000466136 431 ntBASIC5.64□□□□□ -1.51
CCL4P13236 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.64□□□□□ -1.51
CCL4P13236 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.64□□□□□ -1.51
CCL4P13236 AOX3P-204ENST00000491025 2107 ntBASIC5.64□□□□□ -1.51
CCL4P13236 AC008638.1-201ENST00000506035 866 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms