Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.6□□□□□ -1.35
VTNP04004 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VTNP04004 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VTNP04004 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.6□□□□□ -1.35
VTNP04004 AC011445.2-201ENST00000599274 173 ntBASIC6.6□□□□□ -1.35
VTNP04004 AL031601.1-201ENST00000605702 394 ntBASIC6.6□□□□□ -1.35
VTNP04004 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.6□□□□□ -1.35
VTNP04004 AL662795.2-201ENST00000624252 3706 ntBASIC6.6□□□□□ -1.35
VTNP04004 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VTNP04004 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
VTNP04004 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.6□□□□□ -1.35
VTNP04004 BRD7P6-201ENST00000431406 1860 ntBASIC6.6□□□□□ -1.35
VTNP04004 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VTNP04004 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VTNP04004 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VTNP04004 Z93929.1-201ENST00000418200 1475 ntBASIC6.6□□□□□ -1.35
VTNP04004 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VTNP04004 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.59□□□□□ -1.35
VTNP04004 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.59□□□□□ -1.35
VTNP04004 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VTNP04004 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
VTNP04004 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
VTNP04004 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.59□□□□□ -1.35
VTNP04004 PARP4P2-201ENST00000446672 3326 ntBASIC6.59□□□□□ -1.35
VTNP04004 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
VTNP04004 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.59□□□□□ -1.35
VTNP04004 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
VTNP04004 RN7SKP128-201ENST00000364270 303 ntBASIC6.59□□□□□ -1.35
VTNP04004 RNA5SP500-201ENST00000364486 119 ntBASIC6.59□□□□□ -1.35
VTNP04004 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
VTNP04004 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
VTNP04004 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.59□□□□□ -1.35
VTNP04004 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.59□□□□□ -1.35
VTNP04004 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.59□□□□□ -1.35
VTNP04004 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.59□□□□□ -1.35
VTNP04004 AL022319.1-201ENST00000458183 1167 ntBASIC6.59□□□□□ -1.35
VTNP04004 RN7SL273P-201ENST00000481561 299 ntBASIC6.59□□□□□ -1.35
VTNP04004 TPM3P3-201ENST00000521343 354 ntBASIC6.59□□□□□ -1.35
VTNP04004 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.59□□□□□ -1.35
VTNP04004 AC079600.1-201ENST00000550326 297 ntBASIC6.59□□□□□ -1.35
VTNP04004 AC119403.2-201ENST00000590960 598 ntBASIC6.59□□□□□ -1.35
VTNP04004 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.59□□□□□ -1.35
VTNP04004 FAM27E4-201ENST00000605259 342 ntBASIC6.59□□□□□ -1.35
VTNP04004 AC126175.1-201ENST00000617041 758 ntBASIC6.59□□□□□ -1.35
VTNP04004 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VTNP04004 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.59□□□□□ -1.35
VTNP04004 AC008957.3-201ENST00000624112 2242 ntBASIC6.59□□□□□ -1.35
VTNP04004 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
VTNP04004 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
VTNP04004 OLMALINC-203ENST00000641087 3779 ntBASIC6.59□□□□□ -1.35
VTNP04004 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
VTNP04004 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
VTNP04004 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
VTNP04004 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.36
VTNP04004 AC106872.5-201ENST00000508856 1416 ntBASIC6.59□□□□□ -1.36
VTNP04004 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VTNP04004 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.58□□□□□ -1.36
VTNP04004 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VTNP04004 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
VTNP04004 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VTNP04004 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.58□□□□□ -1.36
VTNP04004 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VTNP04004 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.58□□□□□ -1.36
VTNP04004 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
VTNP04004 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VTNP04004 PTCD2P2-201ENST00000415579 1095 ntBASIC6.58□□□□□ -1.36
VTNP04004 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.58□□□□□ -1.36
VTNP04004 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.58□□□□□ -1.36
VTNP04004 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.58□□□□□ -1.36
VTNP04004 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.58□□□□□ -1.36
VTNP04004 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.58□□□□□ -1.36
VTNP04004 RPS7P3-201ENST00000443360 580 ntBASIC6.58□□□□□ -1.36
VTNP04004 HMGN1P36-201ENST00000446623 298 ntBASIC6.58□□□□□ -1.36
VTNP04004 AL445665.1-202ENST00000452436 324 ntBASIC6.58□□□□□ -1.36
VTNP04004 RAB28P2-201ENST00000454299 641 ntBASIC6.58□□□□□ -1.36
VTNP04004 AC104164.1-201ENST00000460282 590 ntBASIC6.58□□□□□ -1.36
VTNP04004 RN7SL352P-201ENST00000466002 277 ntBASIC6.58□□□□□ -1.36
VTNP04004 RN7SL57P-201ENST00000493687 290 ntBASIC6.58□□□□□ -1.36
VTNP04004 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.58□□□□□ -1.36
VTNP04004 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.58□□□□□ -1.36
VTNP04004 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.58□□□□□ -1.36
VTNP04004 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.58□□□□□ -1.36
VTNP04004 OR4A40P-201ENST00000533878 948 ntBASIC6.58□□□□□ -1.36
VTNP04004 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.58□□□□□ -1.36
VTNP04004 AC020978.7-201ENST00000575953 1187 ntBASIC6.58□□□□□ -1.36
VTNP04004 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.58□□□□□ -1.36
VTNP04004 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
VTNP04004 AC009237.12-201ENST00000604755 742 ntBASIC6.58□□□□□ -1.36
VTNP04004 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
VTNP04004 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.58□□□□□ -1.36
VTNP04004 USP9YP3-201ENST00000434481 1766 ntBASIC6.58□□□□□ -1.36
VTNP04004 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.58□□□□□ -1.36
VTNP04004 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VTNP04004 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.58□□□□□ -1.36
VTNP04004 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
VTNP04004 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VTNP04004 AC009831.5-201ENST00000624000 3189 ntBASIC6.57□□□□□ -1.36
VTNP04004 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
VTNP04004 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VTNP04004 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms