Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL121579.2-201ENST00000555466 590 ntBASIC5.71□□□□□ -1.5
SSX4O60224 ANP32BP1-202ENST00000568553 737 ntBASIC5.71□□□□□ -1.5
SSX4O60224 RN7SL199P-201ENST00000578752 281 ntBASIC5.71□□□□□ -1.5
SSX4O60224 RN7SL656P-201ENST00000579044 281 ntBASIC5.71□□□□□ -1.5
SSX4O60224 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.71□□□□□ -1.5
SSX4O60224 RN7SL404P-201ENST00000582421 281 ntBASIC5.71□□□□□ -1.5
SSX4O60224 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.71□□□□□ -1.5
SSX4O60224 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.71□□□□□ -1.5
SSX4O60224 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.71□□□□□ -1.5
SSX4O60224 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.71□□□□□ -1.5
SSX4O60224 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.71□□□□□ -1.5
SSX4O60224 MIR6778-201ENST00000617912 73 ntBASIC5.71□□□□□ -1.5
SSX4O60224 MIR7854-201ENST00000620068 65 ntBASIC5.71□□□□□ -1.5
SSX4O60224 RAB28P4-201ENST00000622233 665 ntBASIC5.71□□□□□ -1.5
SSX4O60224 AP000550.3-201ENST00000637734 379 ntBASIC5.71□□□□□ -1.5
SSX4O60224 Z97989.1-201ENST00000531702 2421 ntBASIC5.71□□□□□ -1.5
SSX4O60224 CASC19-228ENST00000641414 1684 ntBASIC5.71□□□□□ -1.5
SSX4O60224 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SSX4O60224 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SSX4O60224 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSX4O60224 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SSX4O60224 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.71□□□□□ -1.5
SSX4O60224 AP002512.4-202ENST00000641599 4530 ntBASIC5.71□□□□□ -1.5
SSX4O60224 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SSX4O60224 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSX4O60224 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSX4O60224 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.7□□□□□ -1.5
SSX4O60224 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.7□□□□□ -1.5
SSX4O60224 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.7□□□□□ -1.5
SSX4O60224 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSX4O60224 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSX4O60224 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSX4O60224 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SSX4O60224 RNA5SP321-201ENST00000362722 111 ntBASIC5.7□□□□□ -1.5
SSX4O60224 RNU6-1331P-201ENST00000363658 106 ntBASIC5.7□□□□□ -1.5
SSX4O60224 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SSX4O60224 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSX4O60224 PSMA6P1-201ENST00000400275 741 ntBASIC5.7□□□□□ -1.5
SSX4O60224 RPL12P23-201ENST00000405880 490 ntBASIC5.7□□□□□ -1.5
SSX4O60224 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.7□□□□□ -1.5
SSX4O60224 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.7□□□□□ -1.5
SSX4O60224 RANP6-201ENST00000413691 644 ntBASIC5.7□□□□□ -1.5
SSX4O60224 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.7□□□□□ -1.5
SSX4O60224 RCC2P2-201ENST00000422174 918 ntBASIC5.7□□□□□ -1.5
SSX4O60224 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.7□□□□□ -1.5
SSX4O60224 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.7□□□□□ -1.5
SSX4O60224 AC093166.3-201ENST00000448785 303 ntBASIC5.7□□□□□ -1.5
SSX4O60224 MTND2P3-201ENST00000452458 470 ntBASIC5.7□□□□□ -1.5
SSX4O60224 AL358876.1-201ENST00000453364 1075 ntBASIC5.7□□□□□ -1.5
SSX4O60224 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.7□□□□□ -1.5
SSX4O60224 AC090058.1-201ENST00000498788 435 ntBASIC5.7□□□□□ -1.5
SSX4O60224 ATG10-AS1-201ENST00000504846 648 ntBASIC5.7□□□□□ -1.5
SSX4O60224 AC093664.1-201ENST00000511779 289 ntBASIC5.7□□□□□ -1.5
SSX4O60224 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.7□□□□□ -1.5
SSX4O60224 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.7□□□□□ -1.5
SSX4O60224 MAST4-IT1-201ENST00000514241 658 ntBASIC5.7□□□□□ -1.5
SSX4O60224 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.7□□□□□ -1.5
SSX4O60224 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSX4O60224 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.7□□□□□ -1.5
SSX4O60224 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.7□□□□□ -1.5
SSX4O60224 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.7□□□□□ -1.5
SSX4O60224 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.7□□□□□ -1.5
SSX4O60224 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.7□□□□□ -1.5
SSX4O60224 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.7□□□□□ -1.5
SSX4O60224 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.7□□□□□ -1.5
SSX4O60224 AC063977.7-201ENST00000594454 337 ntBASIC5.7□□□□□ -1.5
SSX4O60224 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.7□□□□□ -1.5
SSX4O60224 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.7□□□□□ -1.5
SSX4O60224 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.7□□□□□ -1.5
SSX4O60224 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.7□□□□□ -1.5
SSX4O60224 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.7□□□□□ -1.5
SSX4O60224 AL035425.4-201ENST00000624509 1063 ntBASIC5.7□□□□□ -1.5
SSX4O60224 AC000095.2-202ENST00000637415 154 ntBASIC5.7□□□□□ -1.5
SSX4O60224 CASC19-274ENST00000642018 970 ntBASIC5.7□□□□□ -1.5
SSX4O60224 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.7□□□□□ -1.5
SSX4O60224 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.7□□□□□ -1.5
SSX4O60224 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.7□□□□□ -1.5
SSX4O60224 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SSX4O60224 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSX4O60224 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSX4O60224 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SSX4O60224 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSX4O60224 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.7□□□□□ -1.5
SSX4O60224 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSX4O60224 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SSX4O60224 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SSX4O60224 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.69□□□□□ -1.5
SSX4O60224 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.69□□□□□ -1.5
SSX4O60224 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX4O60224 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX4O60224 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SSX4O60224 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSX4O60224 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX4O60224 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSX4O60224 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SSX4O60224 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.69□□□□□ -1.5
SSX4O60224 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSX4O60224 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.69□□□□□ -1.5
SSX4O60224 RNU1-46P-201ENST00000384425 164 ntBASIC5.69□□□□□ -1.5
SSX4O60224 RPL23AP17-201ENST00000401064 499 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms