Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 LDHAP2-201ENST00000437325 985 ntBASIC6.5□□□□□ -1.37
O00370 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
O00370 AC002553.3-201ENST00000453002 341 ntBASIC6.5□□□□□ -1.37
O00370 PPIAP7-201ENST00000454070 489 ntBASIC6.5□□□□□ -1.37
O00370 AC090058.1-201ENST00000498788 435 ntBASIC6.5□□□□□ -1.37
O00370 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.5□□□□□ -1.37
O00370 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.5□□□□□ -1.37
O00370 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.5□□□□□ -1.37
O00370 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.5□□□□□ -1.37
O00370 AC130365.2-201ENST00000525882 1201 ntBASIC6.5□□□□□ -1.37
O00370 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
O00370 AP000620.1-201ENST00000527147 504 ntBASIC6.5□□□□□ -1.37
O00370 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
O00370 AC023310.2-201ENST00000553844 547 ntBASIC6.5□□□□□ -1.37
O00370 AC090651.1-201ENST00000567865 634 ntBASIC6.5□□□□□ -1.37
O00370 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.5□□□□□ -1.37
O00370 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.5□□□□□ -1.37
O00370 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.5□□□□□ -1.37
O00370 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
O00370 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.5□□□□□ -1.37
O00370 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.5□□□□□ -1.37
O00370 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.5□□□□□ -1.37
O00370 RN7SL261P-201ENST00000613441 282 ntBASIC6.5□□□□□ -1.37
O00370 RFPL4AP6-201ENST00000616792 846 ntBASIC6.5□□□□□ -1.37
O00370 AL512652.1-201ENST00000619006 500 ntBASIC6.5□□□□□ -1.37
O00370 AC132825.8-201ENST00000640783 297 ntBASIC6.5□□□□□ -1.37
O00370 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
O00370 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.5□□□□□ -1.37
O00370 AC079753.1-201ENST00000623243 3868 ntBASIC6.5□□□□□ -1.37
O00370 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
O00370 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
O00370 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
O00370 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
O00370 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.5□□□□□ -1.37
O00370 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
O00370 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.5□□□□□ -1.37
O00370 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
O00370 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
O00370 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
O00370 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.49□□□□□ -1.37
O00370 AL355834.1-201ENST00000556602 3965 ntBASIC6.49□□□□□ -1.37
O00370 AL592429.1-201ENST00000403909 1473 ntBASIC6.49□□□□□ -1.37
O00370 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
O00370 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
O00370 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
O00370 AC015977.1-201ENST00000418887 292 ntBASIC6.49□□□□□ -1.37
O00370 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.49□□□□□ -1.37
O00370 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.49□□□□□ -1.37
O00370 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.49□□□□□ -1.37
O00370 AC093166.3-201ENST00000448785 303 ntBASIC6.49□□□□□ -1.37
O00370 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
O00370 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.49□□□□□ -1.37
O00370 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.49□□□□□ -1.37
O00370 AC093815.1-201ENST00000508637 280 ntBASIC6.49□□□□□ -1.37
O00370 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.49□□□□□ -1.37
O00370 RNA5SP473-201ENST00000516402 125 ntBASIC6.49□□□□□ -1.37
O00370 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.49□□□□□ -1.37
O00370 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.49□□□□□ -1.37
O00370 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.49□□□□□ -1.37
O00370 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.49□□□□□ -1.37
O00370 MIR4502-201ENST00000580432 81 ntBASIC6.49□□□□□ -1.37
O00370 AP001542.1-201ENST00000591314 200 ntBASIC6.49□□□□□ -1.37
O00370 AL157762.1-201ENST00000619612 415 ntBASIC6.49□□□□□ -1.37
O00370 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.49□□□□□ -1.37
O00370 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
O00370 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.49□□□□□ -1.37
O00370 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
O00370 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
O00370 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.49□□□□□ -1.37
O00370 AC025470.1-201ENST00000510053 2032 ntBASIC6.49□□□□□ -1.37
O00370 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
O00370 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
O00370 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
O00370 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
O00370 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
O00370 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.48□□□□□ -1.37
O00370 AC119674.1-202ENST00000641333 1860 ntBASIC6.48□□□□□ -1.37
O00370 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
O00370 RNA5SP375-201ENST00000362975 119 ntBASIC6.48□□□□□ -1.37
O00370 RNU1-65P-201ENST00000363919 148 ntBASIC6.48□□□□□ -1.37
O00370 RPL35AP31-201ENST00000418340 337 ntBASIC6.48□□□□□ -1.37
O00370 RPS15AP30-201ENST00000420976 390 ntBASIC6.48□□□□□ -1.37
O00370 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.48□□□□□ -1.37
O00370 SEPT14P12-201ENST00000442280 560 ntBASIC6.48□□□□□ -1.37
O00370 OR52I1-201ENST00000450052 1050 ntBASIC6.48□□□□□ -1.37
O00370 AC118758.1-202ENST00000454719 225 ntBASIC6.48□□□□□ -1.37
O00370 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.48□□□□□ -1.37
O00370 RPL7L1P3-201ENST00000455249 689 ntBASIC6.48□□□□□ -1.37
O00370 BLNK-209ENST00000495266 440 ntTSL 5 BASIC6.48□□□□□ -1.37
O00370 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.48□□□□□ -1.37
O00370 Vault.2-201ENST00000516519 98 ntBASIC6.48□□□□□ -1.37
O00370 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.48□□□□□ -1.37
O00370 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.48□□□□□ -1.37
O00370 AC007346.1-201ENST00000569208 867 ntBASIC6.48□□□□□ -1.37
O00370 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.48□□□□□ -1.37
O00370 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.48□□□□□ -1.37
O00370 AC073333.2-201ENST00000603589 769 ntBASIC6.48□□□□□ -1.37
O00370 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC6.48□□□□□ -1.37
O00370 AC005899.7-201ENST00000618199 588 ntBASIC6.48□□□□□ -1.37
O00370 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms