Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AL365181.4-201ENST00000609800 547 ntBASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 AC105114.1-201ENST00000624795 1862 ntBASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 HSPD1P9-201ENST00000420325 1636 ntBASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 SNORD16-201ENST00000362803 99 ntBASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 LCN1P2-201ENST00000372030 223 ntBASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 AL451142.1-201ENST00000375867 775 ntBASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 DHFRP2-201ENST00000414224 547 ntBASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 AL590399.4-201ENST00000436561 601 ntBASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 CXCR2P1-202ENST00000443392 1074 ntBASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 AC068228.1-201ENST00000461723 211 ntBASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 RPL12P24-201ENST00000474907 486 ntBASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 AC083906.1-201ENST00000509298 406 ntBASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 AP004609.2-201ENST00000532177 190 ntBASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 DPPA3P2-202ENST00000557188 1219 ntBASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 BUB1P1-201ENST00000603541 607 ntBASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
SSX2IPQ9Y2D8 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 AL591848.4-201ENST00000567832 3472 ntBASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 COX6B1P3-201ENST00000312310 260 ntBASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 AC004386.1-201ENST00000393214 761 ntBASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 GABARAPL3-201ENST00000412799 354 ntBASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 IGHV4-55-201ENST00000520889 368 ntBASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 TRIM51DP-201ENST00000529746 596 ntBASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 AC025423.2-201ENST00000537570 439 ntBASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 AC234775.3-201ENST00000564612 656 ntBASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 BNIP3P39-201ENST00000601077 554 ntBASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 AC092944.2-201ENST00000605443 889 ntBASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 RPSAP75-201ENST00000605848 301 ntBASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.87□□□□□ -1.31
SSX2IPQ9Y2D8 AL355816.2-201ENST00000610049 647 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms