Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 SNORA64.3-201ENST00000365647 134 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 RNU6-761P-201ENST00000384148 107 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 MIR498-201ENST00000385134 124 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 RN7SKP207-201ENST00000411204 303 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 AHCYP8-201ENST00000425108 209 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 IPMKP1-201ENST00000425988 855 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 AC128677.1-201ENST00000436016 442 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 AC092601.1-201ENST00000444526 383 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 RN7SL492P-201ENST00000460700 295 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 RN7SL221P-201ENST00000466190 281 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 AC015524.1-201ENST00000491585 472 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 AC093281.2-201ENST00000510153 597 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 AC026782.2-201ENST00000510845 636 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 GCSHP1-201ENST00000512554 484 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 LECT2-203ENST00000512872 762 ntTSL 5 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 MAST4-IT1-201ENST00000514241 658 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 IGKV2-29-201ENST00000521304 372 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 AP001804.1-201ENST00000526868 919 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 ACER3-213ENST00000533873 929 ntTSL 2 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 AC026826.3-201ENST00000561747 158 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 EEF1B2P1-201ENST00000567221 672 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 AC012435.1-202ENST00000568772 240 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 AC128687.1-201ENST00000605304 619 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 AC018690.1-201ENST00000608144 626 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 AC011471.4-201ENST00000638271 216 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 EEF1A1P21-201ENST00000512363 1344 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 AL136146.1-201ENST00000529830 1667 ntBASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
ZC3H4Q9UPT8 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 Y_RNA.41-201ENST00000362646 102 ntBASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 RNA5SP232-201ENST00000364144 119 ntBASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 MIR1272-201ENST00000408106 129 ntBASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 Z75741.2-201ENST00000417272 1167 ntBASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 TRBV29OR9-2-201ENST00000427589 333 ntBASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 MTND3P23-201ENST00000431980 347 ntBASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 MTCYBP42-201ENST00000444653 1130 ntBASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 AC007327.1-201ENST00000447461 264 ntBASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 AL591122.1-201ENST00000487348 492 ntBASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 AC090058.1-201ENST00000498788 435 ntBASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
ZC3H4Q9UPT8 SLC25A36P1-201ENST00000590111 465 ntBASIC8.86□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms