Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 NME1P1-201ENST00000420914 382 ntBASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 HMGN1P2-201ENST00000445197 310 ntBASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 RPL5P10-201ENST00000445207 894 ntBASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 RAB28P2-201ENST00000454299 641 ntBASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 SCARNA18.1-201ENST00000516330 83 ntBASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 OR56A7P-201ENST00000524865 941 ntBASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 AC090888.3-201ENST00000558917 509 ntBASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 AC005244.1-201ENST00000582566 339 ntBASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 AC096708.4-201ENST00000620563 552 ntBASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ECHDC3Q96DC8 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 RN7SKP166-201ENST00000410812 305 ntBASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 DNAJA1P5-201ENST00000440278 943 ntBASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 PCNPP2-201ENST00000441651 455 ntBASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 AL359839.1-201ENST00000451975 1160 ntBASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 GEMIN2P1-201ENST00000454246 752 ntBASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 RN7SL352P-201ENST00000466002 277 ntBASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 RN7SL269P-201ENST00000467795 305 ntBASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 AL035690.1-201ENST00000490892 383 ntBASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 AC008945.1-201ENST00000505144 499 ntBASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 SNORA81.2-201ENST00000516868 170 ntBASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 TPM3P3-201ENST00000521343 354 ntBASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 TRIM77BP-201ENST00000524985 1119 ntBASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 AC110056.1-201ENST00000525759 911 ntBASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 AP003396.4-201ENST00000527574 265 ntBASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 AL136131.3-201ENST00000607600 188 ntBASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ECHDC3Q96DC8 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 AC139426.3-201ENST00000605648 2059 ntBASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms