Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 RNU1-65P-201ENST00000363919 148 ntBASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 AL391419.1-201ENST00000398901 1275 ntBASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 VIM2P-201ENST00000402383 1294 ntBASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 RN7SKP281-201ENST00000410472 352 ntBASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 AL359885.1-201ENST00000415786 903 ntBASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 AL445528.1-201ENST00000426330 420 ntBASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 FAR1P1-201ENST00000427163 934 ntBASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 GAPDHP59-201ENST00000435908 267 ntBASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 TIMM8BP2-201ENST00000445940 251 ntBASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 MORF4L1P4-201ENST00000450245 976 ntBASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 AC021006.1-201ENST00000489849 553 ntBASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 SNORA26.10-201ENST00000516427 141 ntBASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 MIR3154-201ENST00000577829 84 ntBASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 AP002371.2-201ENST00000624450 503 ntBASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 TEX41-293ENST00000630451 690 ntTSL 5 BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 AL662795.2-201ENST00000624252 3706 ntBASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
CHMP4CQ96CF2 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 PSMA6P1-201ENST00000400275 741 ntBASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 PRELID1P1-201ENST00000403549 660 ntBASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 GLS-203ENST00000409215 632 ntTSL 4 BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 RNU2-18P-201ENST00000411224 162 ntBASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 MTND4LP17-201ENST00000414607 293 ntBASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 OSTCP4-201ENST00000424397 449 ntBASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 AC083862.1-201ENST00000427378 1242 ntBASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 AL606490.8-201ENST00000441624 319 ntBASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 PPP1R11P1-201ENST00000486095 376 ntBASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 AC113367.2-201ENST00000505749 160 ntBASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 MTND1P36-201ENST00000522384 936 ntBASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 AL133399.1-201ENST00000527476 298 ntBASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 AC073046.2-201ENST00000604756 527 ntBASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 AC024589.2-201ENST00000605642 1294 ntBASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 AL137246.2-201ENST00000613439 662 ntBASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 MIR6806-201ENST00000622141 64 ntBASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 AC022034.1-201ENST00000512867 2156 ntBASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 AC125238.2-201ENST00000430003 1440 ntBASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 CUL4AP1-201ENST00000514750 1863 ntBASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.6□□□□□ -1.19
CHMP4CQ96CF2 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 AC062029.1-202ENST00000606164 3651 ntBASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 Y_RNA.110-201ENST00000363220 99 ntBASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 RNA5SP478-201ENST00000364657 115 ntBASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms