Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC8.31□□□□□ -1.08
HLA-CQ95604 RN7SL456P-201ENST00000469290 295 ntBASIC8.31□□□□□ -1.08
HLA-CQ95604 RPL21P42-201ENST00000488408 464 ntBASIC8.31□□□□□ -1.08
HLA-CQ95604 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HLA-CQ95604 AC011352.3-201ENST00000505162 593 ntBASIC8.31□□□□□ -1.08
HLA-CQ95604 SNX5P1-201ENST00000505757 1041 ntBASIC8.31□□□□□ -1.08
HLA-CQ95604 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC8.31□□□□□ -1.08
HLA-CQ95604 AC105914.1-201ENST00000511798 226 ntBASIC8.31□□□□□ -1.08
HLA-CQ95604 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HLA-CQ95604 IGHVII-78-1-201ENST00000521105 269 ntBASIC8.31□□□□□ -1.08
HLA-CQ95604 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC8.31□□□□□ -1.08
HLA-CQ95604 ARL2BPP5-201ENST00000523141 481 ntBASIC8.31□□□□□ -1.08
HLA-CQ95604 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC8.31□□□□□ -1.08
HLA-CQ95604 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC8.31□□□□□ -1.08
HLA-CQ95604 OR5AP1P-201ENST00000529730 940 ntBASIC8.31□□□□□ -1.08
HLA-CQ95604 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC8.31□□□□□ -1.08
HLA-CQ95604 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC8.31□□□□□ -1.08
HLA-CQ95604 CHEK2P2-201ENST00000554701 672 ntBASIC8.31□□□□□ -1.08
HLA-CQ95604 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC8.31□□□□□ -1.08
HLA-CQ95604 AC006116.6-201ENST00000593258 1103 ntBASIC8.31□□□□□ -1.08
HLA-CQ95604 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC8.31□□□□□ -1.08
HLA-CQ95604 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC8.31□□□□□ -1.08
HLA-CQ95604 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC8.31□□□□□ -1.08
HLA-CQ95604 MARK3P1-201ENST00000604796 643 ntBASIC8.31□□□□□ -1.08
HLA-CQ95604 BNIP3P10-201ENST00000605360 577 ntBASIC8.31□□□□□ -1.08
HLA-CQ95604 AC027807.2-201ENST00000616099 408 ntBASIC8.31□□□□□ -1.08
HLA-CQ95604 AC006840.1-201ENST00000623069 542 ntBASIC8.31□□□□□ -1.08
HLA-CQ95604 ANAPC1-210ENST00000628342 450 ntTSL 5 BASIC8.31□□□□□ -1.08
HLA-CQ95604 MIR3662-201ENST00000637030 95 ntBASIC8.31□□□□□ -1.08
HLA-CQ95604 HHAT-204ENST00000413764 3575 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
HLA-CQ95604 ZMAT4-201ENST00000297737 2466 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
HLA-CQ95604 OR11A1-202ENST00000377148 2482 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
HLA-CQ95604 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
HLA-CQ95604 RPGR-202ENST00000339363 3686 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
HLA-CQ95604 AC110926.1-201ENST00000412499 2825 ntBASIC8.31□□□□□ -1.08
HLA-CQ95604 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
HLA-CQ95604 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HLA-CQ95604 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
HLA-CQ95604 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HLA-CQ95604 AC008543.1-201ENST00000344893 3383 ntTSL 2 BASIC8.31□□□□□ -1.08
HLA-CQ95604 FAM107A-201ENST00000360997 3367 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HLA-CQ95604 C11orf70-201ENST00000434758 2193 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
HLA-CQ95604 TARS-202ENST00000455217 2523 ntTSL 2 BASIC8.31□□□□□ -1.08
HLA-CQ95604 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
HLA-CQ95604 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
HLA-CQ95604 SLC17A2-202ENST00000360488 2270 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
HLA-CQ95604 PAPPA2-201ENST00000367661 4369 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HLA-CQ95604 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC8.31□□□□□ -1.08
HLA-CQ95604 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC8.31□□□□□ -1.08
HLA-CQ95604 FAM193A-204ENST00000505311 4110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
HLA-CQ95604 PLG-202ENST00000308192 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HLA-CQ95604 AL133279.3-201ENST00000563140 2352 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC8.3□□□□□ -1.08
HLA-CQ95604 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HLA-CQ95604 ITGB6-201ENST00000283249 4675 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HLA-CQ95604 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC8.3□□□□□ -1.08
HLA-CQ95604 AC116456.2-201ENST00000623018 2209 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 CNOT4-212ENST00000541284 3563 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
HLA-CQ95604 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC8.3□□□□□ -1.08
HLA-CQ95604 PRDM10-205ENST00000526082 3308 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
HLA-CQ95604 ZNF185-204ENST00000370268 4305 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
HLA-CQ95604 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
HLA-CQ95604 SUN1-203ENST00000401592 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
HLA-CQ95604 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HLA-CQ95604 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
HLA-CQ95604 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
HLA-CQ95604 SNORD56.2-201ENST00000363242 71 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 Y_RNA.431-201ENST00000384086 102 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
HLA-CQ95604 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
HLA-CQ95604 MIR1284-201ENST00000408337 120 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 AL022329.1-201ENST00000412773 488 ntTSL 2 BASIC8.3□□□□□ -1.08
HLA-CQ95604 RANP6-201ENST00000413691 644 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC8.3□□□□□ -1.08
HLA-CQ95604 AL359633.1-201ENST00000421403 310 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 RPS27AP14-201ENST00000422868 454 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC8.3□□□□□ -1.08
HLA-CQ95604 AP001324.1-201ENST00000428553 399 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 LINC00328-2P-201ENST00000436585 219 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC8.3□□□□□ -1.08
HLA-CQ95604 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC8.3□□□□□ -1.08
HLA-CQ95604 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC8.3□□□□□ -1.08
HLA-CQ95604 AC009244.1-201ENST00000450566 258 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC8.3□□□□□ -1.08
HLA-CQ95604 OR7E7P-201ENST00000455678 1012 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC8.3□□□□□ -1.08
HLA-CQ95604 RN7SL791P-201ENST00000467868 295 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 AC087312.1-201ENST00000471411 480 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 STXBP5L-204ENST00000471454 3813 ntAPPRIS ALT1 TSL 2 BASIC8.3□□□□□ -1.08
HLA-CQ95604 AC023598.1-201ENST00000472521 361 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
HLA-CQ95604 RN7SL516P-201ENST00000496127 297 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
HLA-CQ95604 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
HLA-CQ95604 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC8.3□□□□□ -1.08
HLA-CQ95604 COX4I1P1-201ENST00000554239 509 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 PSMA3P-201ENST00000555485 635 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 AL121821.2-201ENST00000556081 394 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC8.3□□□□□ -1.08
HLA-CQ95604 AC126323.4-201ENST00000566935 234 ntBASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms