Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 SNX18P24-201ENST00000505249 671 ntBASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 RNA5SP206-201ENST00000516703 121 ntBASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 AC008429.4-201ENST00000521201 182 ntBASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 AP001858.2-201ENST00000536213 601 ntBASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 RN7SL66P-201ENST00000582099 264 ntBASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 LSM1P2-201ENST00000604911 322 ntBASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 MIR6885-201ENST00000612241 66 ntBASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 MIR6811-201ENST00000620409 58 ntBASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 AC109446.4-201ENST00000623235 2755 ntBASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 CASC19-246ENST00000641625 1606 ntBASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 AC004158.1-201ENST00000564508 4319 ntBASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.42□□□□□ -1.38
CCDC50Q8IVM0 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 AC022325.1-201ENST00000502748 2199 ntBASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 AL359955.1-201ENST00000455242 3275 ntBASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 RNA5SP375-201ENST00000362975 119 ntBASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 BX276092.6-201ENST00000430476 250 ntBASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 IGLV3-4-201ENST00000432300 244 ntBASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 OR2L9P-201ENST00000444456 913 ntBASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 BX276092.8-201ENST00000455722 250 ntBASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 AC124945.1-201ENST00000485133 188 ntBASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 CYP4F27P-201ENST00000514557 494 ntBASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 TPM3P3-201ENST00000521343 354 ntBASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 TDGP1-201ENST00000543961 1229 ntBASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 AC139792.1-201ENST00000607051 647 ntBASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 AL591167.1-201ENST00000607321 456 ntBASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CCDC50Q8IVM0 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 MTND2P12-201ENST00000417560 1252 ntBASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 AC117434.1-201ENST00000419971 836 ntBASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 AC128677.1-201ENST00000436016 442 ntBASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 AL445991.1-201ENST00000450381 475 ntBASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 OSTCP1-201ENST00000455507 450 ntBASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 AC114324.2-202ENST00000503812 134 ntBASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 KHDC1P1-201ENST00000511053 508 ntBASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms