Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 NRP1-206ENST00000374867 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS13CQ709C8 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 ZNF236-201ENST00000253159 8124 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS13CQ709C8 MYO7B-203ENST00000428314 6715 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS13CQ709C8 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS13CQ709C8 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS13CQ709C8 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS13CQ709C8 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS13CQ709C8 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS13CQ709C8 AC092647.2-201ENST00000452998 253 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 NUTF2P7-201ENST00000453086 375 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS13CQ709C8 AC026979.1-201ENST00000492525 396 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 SNORA70.11-201ENST00000515987 138 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 SNORA70.13-201ENST00000516116 138 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS13CQ709C8 AC006206.1-201ENST00000544842 3387 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS13CQ709C8 AC144833.1-201ENST00000567953 4089 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS13CQ709C8 DNAJC27-AS1-205ENST00000434897 4660 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VPS13CQ709C8 ESR1-208ENST00000443427 6357 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
VPS13CQ709C8 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VPS13CQ709C8 RNU4-4P-201ENST00000364588 130 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 RNU1-43P-201ENST00000365052 165 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 AL590139.1-201ENST00000416267 400 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 KNOP1P3-201ENST00000446933 426 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 AC090142.2-201ENST00000483263 416 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 OR11I1P-201ENST00000486033 954 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 AC244502.2-201ENST00000543361 851 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 AL110118.1-201ENST00000553543 400 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 uc_338.26-201ENST00000612659 160 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 WBP1LP8-201ENST00000617401 327 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS13CQ709C8 LRRC55-201ENST00000497933 5410 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS13CQ709C8 LINC01616-201ENST00000561816 2280 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 AC025809.2-201ENST00000625085 1802 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS13CQ709C8 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS13CQ709C8 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS13CQ709C8 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
VPS13CQ709C8 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
VPS13CQ709C8 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS13CQ709C8 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS13CQ709C8 RPL7P61-201ENST00000451721 751 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 RPL23AP40-201ENST00000487630 390 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
VPS13CQ709C8 AL049872.1-201ENST00000556323 322 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 MIR4480-201ENST00000582492 71 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS13CQ709C8 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS13CQ709C8 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS13CQ709C8 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS13CQ709C8 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS13CQ709C8 HSPA8P18-201ENST00000439846 1928 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 PCAT14-202ENST00000627127 3935 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
VPS13CQ709C8 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VPS13CQ709C8 RN7SKP23-201ENST00000625159 4301 ntBASIC4.67□□□□□ -1.66
VPS13CQ709C8 DOPEY2-202ENST00000399151 7685 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS13CQ709C8 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
VPS13CQ709C8 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
VPS13CQ709C8 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS13CQ709C8 CAV1-204ENST00000393470 598 ntTSL 4 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS13CQ709C8 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 GYG1P1-201ENST00000460864 698 ntBASIC4.66□□□□□ -1.66
VPS13CQ709C8 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS13CQ709C8 AC104785.1-201ENST00000603220 588 ntBASIC4.66□□□□□ -1.66
VPS13CQ709C8 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 CACNA1E-206ENST00000367573 7067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS13CQ709C8 PBRM1-205ENST00000409057 4980 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS13CQ709C8 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS13CQ709C8 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS13CQ709C8 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 SPATA31B1P-201ENST00000434692 4016 ntBASIC4.66□□□□□ -1.66
VPS13CQ709C8 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS13CQ709C8 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS13CQ709C8 OR55B1P-203ENST00000641518 2602 ntBASIC4.66□□□□□ -1.66
VPS13CQ709C8 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS13CQ709C8 RN7SKP113-201ENST00000363891 295 ntBASIC4.66□□□□□ -1.66
VPS13CQ709C8 RNU1-77P-201ENST00000390868 162 ntBASIC4.66□□□□□ -1.66
VPS13CQ709C8 RPS16P5-201ENST00000406501 404 ntBASIC4.66□□□□□ -1.66
VPS13CQ709C8 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 RPL7AP28-201ENST00000464513 571 ntBASIC4.66□□□□□ -1.66
VPS13CQ709C8 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 AC073581.1-201ENST00000519036 575 ntBASIC4.66□□□□□ -1.66
VPS13CQ709C8 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS13CQ709C8 AC234771.5-201ENST00000600161 514 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms