Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 PFN1P11-201ENST00000445829 389 ntBASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 RN7SL413P-201ENST00000482700 297 ntBASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 AC021146.11-201ENST00000503319 491 ntBASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 AC093664.1-201ENST00000511779 289 ntBASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 RN7SKP34-201ENST00000516142 244 ntBASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 OR1E3-201ENST00000575608 948 ntBASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 AC067852.5-201ENST00000589299 310 ntBASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 AC063977.7-201ENST00000594454 337 ntBASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 AL683813.2-201ENST00000605245 502 ntBASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 AC034236.3-201ENST00000605999 461 ntBASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 AP005229.2-201ENST00000609980 697 ntBASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 BANCR-201ENST00000624238 473 ntTSL 2 BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 AL354702.2-202ENST00000641481 890 ntBASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 AL117339.4-201ENST00000608335 7063 ntBASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 AC009120.2-204ENST00000621548 2032 ntBASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 MAPK10-270ENST00000641102 3538 ntBASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 AC093278.2-201ENST00000564956 2485 ntBASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 SPATA2P1-201ENST00000431223 2055 ntBASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 RNU6-31P-201ENST00000384388 108 ntBASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 YWHAZP4-201ENST00000392459 708 ntBASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 RN7SKP129-201ENST00000410288 299 ntBASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 AC093084.1-201ENST00000424233 687 ntBASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 MTCYBP32-201ENST00000427945 1084 ntBASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 RPL12P11-201ENST00000439970 501 ntBASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 COL11A2P1-205ENST00000441798 676 ntBASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 AC239798.3-201ENST00000454459 408 ntBASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 CCNJP2-201ENST00000457810 1163 ntBASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 RPS27P20-201ENST00000492051 246 ntBASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 PPM1AP1-201ENST00000502740 1135 ntBASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 SNX18P25-201ENST00000510539 758 ntBASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 RN7SL230P-201ENST00000580835 303 ntBASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 AC124283.4-201ENST00000581815 456 ntBASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 EIF1P5-201ENST00000585002 234 ntBASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 AC005034.4-201ENST00000603612 899 ntBASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 AC026741.1-201ENST00000605892 482 ntBASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 AL159169.2-201ENST00000610061 1269 ntBASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 AC111152.1-202ENST00000635848 339 ntBASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
CCDC144BQ3MJ40 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 AC079298.1-201ENST00000625026 1619 ntBASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 AC004014.2-201ENST00000623718 5122 ntBASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
CCDC144BQ3MJ40 MIR541-201ENST00000401360 84 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 337.1 ms