Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC120036.2-201ENST00000509729 1474 ntBASIC5.64□□□□□ -1.51
SOX2P48431 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX2P48431 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX2P48431 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SOX2P48431 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.63□□□□□ -1.51
SOX2P48431 MAPK10-261ENST00000641050 3109 ntBASIC5.63□□□□□ -1.51
SOX2P48431 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX2P48431 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX2P48431 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.63□□□□□ -1.51
SOX2P48431 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SOX2P48431 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.63□□□□□ -1.51
SOX2P48431 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.63□□□□□ -1.51
SOX2P48431 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX2P48431 AP000547.3-204ENST00000588548 2523 ntBASIC5.63□□□□□ -1.51
SOX2P48431 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SOX2P48431 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX2P48431 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX2P48431 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SOX2P48431 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.63□□□□□ -1.51
SOX2P48431 Y_RNA.209-201ENST00000364156 111 ntBASIC5.63□□□□□ -1.51
SOX2P48431 RNA5SP478-201ENST00000364657 115 ntBASIC5.63□□□□□ -1.51
SOX2P48431 MIR187-201ENST00000385062 109 ntBASIC5.63□□□□□ -1.51
SOX2P48431 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SOX2P48431 AC226101.1-201ENST00000401483 387 ntBASIC5.63□□□□□ -1.51
SOX2P48431 Z86062.1-201ENST00000406773 777 ntBASIC5.63□□□□□ -1.51
SOX2P48431 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SOX2P48431 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.63□□□□□ -1.51
SOX2P48431 UBE2V1P14-201ENST00000415815 558 ntBASIC5.63□□□□□ -1.51
SOX2P48431 AL929472.1-201ENST00000417484 429 ntBASIC5.63□□□□□ -1.51
SOX2P48431 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC5.63□□□□□ -1.51
SOX2P48431 NME1P1-201ENST00000420914 382 ntBASIC5.63□□□□□ -1.51
SOX2P48431 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC5.63□□□□□ -1.51
SOX2P48431 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.63□□□□□ -1.51
SOX2P48431 USP12PY-201ENST00000427677 1064 ntBASIC5.63□□□□□ -1.51
SOX2P48431 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.63□□□□□ -1.51
SOX2P48431 AL512661.1-201ENST00000434586 1253 ntBASIC5.63□□□□□ -1.51
SOX2P48431 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC5.63□□□□□ -1.51
SOX2P48431 AC004854.1-201ENST00000440356 349 ntBASIC5.63□□□□□ -1.51
SOX2P48431 AC245517.2-201ENST00000442890 346 ntBASIC5.63□□□□□ -1.51
SOX2P48431 AC092967.1-201ENST00000449016 481 ntBASIC5.63□□□□□ -1.51
SOX2P48431 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.63□□□□□ -1.51
SOX2P48431 AC103563.5-201ENST00000455643 364 ntBASIC5.63□□□□□ -1.51
SOX2P48431 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.63□□□□□ -1.51
SOX2P48431 RPL32P14-201ENST00000463196 378 ntBASIC5.63□□□□□ -1.51
SOX2P48431 NPM1P29-201ENST00000483112 803 ntBASIC5.63□□□□□ -1.51
SOX2P48431 AC025271.1-201ENST00000485045 429 ntBASIC5.63□□□□□ -1.51
SOX2P48431 RN7SL205P-201ENST00000490174 284 ntBASIC5.63□□□□□ -1.51
SOX2P48431 RPL5P14-201ENST00000494197 878 ntBASIC5.63□□□□□ -1.51
SOX2P48431 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.63□□□□□ -1.51
SOX2P48431 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.63□□□□□ -1.51
SOX2P48431 RNU5A-7P-201ENST00000515979 116 ntBASIC5.63□□□□□ -1.51
SOX2P48431 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.63□□□□□ -1.51
SOX2P48431 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.63□□□□□ -1.51
SOX2P48431 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
SOX2P48431 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.63□□□□□ -1.51
SOX2P48431 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX2P48431 NF1P12-201ENST00000549593 583 ntBASIC5.63□□□□□ -1.51
SOX2P48431 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC5.63□□□□□ -1.51
SOX2P48431 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
SOX2P48431 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.63□□□□□ -1.51
SOX2P48431 AC007494.1-201ENST00000562293 760 ntBASIC5.63□□□□□ -1.51
SOX2P48431 AL049838.1-201ENST00000563647 981 ntBASIC5.63□□□□□ -1.51
SOX2P48431 OR4H6P-201ENST00000563771 921 ntBASIC5.63□□□□□ -1.51
SOX2P48431 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC5.63□□□□□ -1.51
SOX2P48431 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.63□□□□□ -1.51
SOX2P48431 QTRT1P1-201ENST00000604344 1078 ntBASIC5.63□□□□□ -1.51
SOX2P48431 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.63□□□□□ -1.51
SOX2P48431 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC5.63□□□□□ -1.51
SOX2P48431 AL121782.1-201ENST00000611242 413 ntBASIC5.63□□□□□ -1.51
SOX2P48431 AC008759.3-201ENST00000613300 508 ntBASIC5.63□□□□□ -1.51
SOX2P48431 BNIP3P41-202ENST00000616656 861 ntBASIC5.63□□□□□ -1.51
SOX2P48431 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SOX2P48431 AC061999.1-201ENST00000624454 177 ntBASIC5.63□□□□□ -1.51
SOX2P48431 AL355480.4-201ENST00000626823 69 ntBASIC5.63□□□□□ -1.51
SOX2P48431 AC135068.11-201ENST00000636378 921 ntBASIC5.63□□□□□ -1.51
SOX2P48431 AC013437.2-201ENST00000639587 677 ntBASIC5.63□□□□□ -1.51
SOX2P48431 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC5.63□□□□□ -1.51
SOX2P48431 PSMC1P6-201ENST00000477233 1319 ntBASIC5.63□□□□□ -1.51
SOX2P48431 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SOX2P48431 AC007159.1-201ENST00000566529 4706 ntBASIC5.63□□□□□ -1.51
SOX2P48431 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SOX2P48431 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX2P48431 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX2P48431 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX2P48431 EEF1A1P28-201ENST00000450915 1403 ntBASIC5.63□□□□□ -1.51
SOX2P48431 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX2P48431 CR382285.2-201ENST00000624662 1495 ntBASIC5.63□□□□□ -1.51
SOX2P48431 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX2P48431 SHQ1P1-201ENST00000437111 1544 ntBASIC5.63□□□□□ -1.51
SOX2P48431 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SOX2P48431 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SOX2P48431 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.63□□□□□ -1.51
SOX2P48431 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX2P48431 AC005261.2-201ENST00000593427 4258 ntBASIC5.62□□□□□ -1.51
SOX2P48431 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SOX2P48431 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.62□□□□□ -1.51
SOX2P48431 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.62□□□□□ -1.51
SOX2P48431 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SOX2P48431 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SOX2P48431 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms