Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.74□□□□□ -1.33
BDNFP23560 CCNJP2-201ENST00000457810 1163 ntBASIC6.74□□□□□ -1.33
BDNFP23560 RN7SL643P-201ENST00000471845 291 ntBASIC6.74□□□□□ -1.33
BDNFP23560 RN7SL369P-201ENST00000477138 299 ntBASIC6.74□□□□□ -1.33
BDNFP23560 AC092824.1-201ENST00000483524 576 ntBASIC6.74□□□□□ -1.33
BDNFP23560 CR383656.1-201ENST00000484916 377 ntBASIC6.74□□□□□ -1.33
BDNFP23560 RN7SL170P-201ENST00000487098 295 ntBASIC6.74□□□□□ -1.33
BDNFP23560 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
BDNFP23560 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.74□□□□□ -1.33
BDNFP23560 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.74□□□□□ -1.33
BDNFP23560 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
BDNFP23560 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.74□□□□□ -1.33
BDNFP23560 AP000619.2-201ENST00000546014 969 ntBASIC6.74□□□□□ -1.33
BDNFP23560 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.74□□□□□ -1.33
BDNFP23560 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.74□□□□□ -1.33
BDNFP23560 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.74□□□□□ -1.33
BDNFP23560 AC060766.1-201ENST00000590824 627 ntBASIC6.74□□□□□ -1.33
BDNFP23560 AC005332.4-201ENST00000592752 579 ntBASIC6.74□□□□□ -1.33
BDNFP23560 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.74□□□□□ -1.33
BDNFP23560 AC073389.3-201ENST00000609434 935 ntBASIC6.74□□□□□ -1.33
BDNFP23560 AC073862.4-201ENST00000622982 854 ntBASIC6.74□□□□□ -1.33
BDNFP23560 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
BDNFP23560 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
BDNFP23560 LYARP1-201ENST00000436977 1501 ntBASIC6.74□□□□□ -1.33
BDNFP23560 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.74□□□□□ -1.33
BDNFP23560 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.74□□□□□ -1.33
BDNFP23560 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
BDNFP23560 AKAP17BP-201ENST00000431706 2719 ntBASIC6.74□□□□□ -1.33
BDNFP23560 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.74□□□□□ -1.33
BDNFP23560 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
BDNFP23560 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
BDNFP23560 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
BDNFP23560 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
BDNFP23560 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
BDNFP23560 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
BDNFP23560 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
BDNFP23560 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
BDNFP23560 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.73□□□□□ -1.33
BDNFP23560 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
BDNFP23560 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.73□□□□□ -1.33
BDNFP23560 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
BDNFP23560 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.73□□□□□ -1.33
BDNFP23560 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.73□□□□□ -1.33
BDNFP23560 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
BDNFP23560 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
BDNFP23560 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
BDNFP23560 AL050335.1-201ENST00000396909 869 ntBASIC6.73□□□□□ -1.33
BDNFP23560 ZNF736P10Y-201ENST00000403990 1110 ntBASIC6.73□□□□□ -1.33
BDNFP23560 AL035422.1-201ENST00000414193 397 ntBASIC6.73□□□□□ -1.33
BDNFP23560 AC112492.2-201ENST00000432774 1030 ntBASIC6.73□□□□□ -1.33
BDNFP23560 AC094019.1-201ENST00000434678 472 ntBASIC6.73□□□□□ -1.33
BDNFP23560 RAD1P2-201ENST00000446414 663 ntBASIC6.73□□□□□ -1.33
BDNFP23560 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.73□□□□□ -1.33
BDNFP23560 AC117394.1-201ENST00000477323 567 ntBASIC6.73□□□□□ -1.33
BDNFP23560 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.73□□□□□ -1.33
BDNFP23560 RPL12P31-201ENST00000478433 450 ntBASIC6.73□□□□□ -1.33
BDNFP23560 RN7SL714P-201ENST00000487050 298 ntBASIC6.73□□□□□ -1.33
BDNFP23560 ATG10-AS1-201ENST00000504846 648 ntBASIC6.73□□□□□ -1.33
BDNFP23560 HAUS1P1-201ENST00000505275 832 ntBASIC6.73□□□□□ -1.33
BDNFP23560 AC091874.2-201ENST00000505889 720 ntBASIC6.73□□□□□ -1.33
BDNFP23560 SNX18P25-201ENST00000510539 758 ntBASIC6.73□□□□□ -1.33
BDNFP23560 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.73□□□□□ -1.33
BDNFP23560 AC011853.1-201ENST00000518911 454 ntBASIC6.73□□□□□ -1.33
BDNFP23560 COX6B1P4-201ENST00000519826 484 ntBASIC6.73□□□□□ -1.33
BDNFP23560 IGHV4-55-201ENST00000520889 368 ntBASIC6.73□□□□□ -1.33
BDNFP23560 AC084337.1-201ENST00000524809 686 ntBASIC6.73□□□□□ -1.33
BDNFP23560 OR7E10P-201ENST00000526420 991 ntBASIC6.73□□□□□ -1.33
BDNFP23560 AC084121.1-201ENST00000533882 835 ntBASIC6.73□□□□□ -1.33
BDNFP23560 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.73□□□□□ -1.33
BDNFP23560 MIR4271-201ENST00000582451 67 ntBASIC6.73□□□□□ -1.33
BDNFP23560 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
BDNFP23560 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.73□□□□□ -1.33
BDNFP23560 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.73□□□□□ -1.33
BDNFP23560 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.73□□□□□ -1.33
BDNFP23560 AC073592.6-201ENST00000624271 415 ntBASIC6.73□□□□□ -1.33
BDNFP23560 AC073593.1-201ENST00000624500 411 ntBASIC6.73□□□□□ -1.33
BDNFP23560 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.73□□□□□ -1.33
BDNFP23560 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
BDNFP23560 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
BDNFP23560 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
BDNFP23560 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
BDNFP23560 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
BDNFP23560 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
BDNFP23560 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.73□□□□□ -1.33
BDNFP23560 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.73□□□□□ -1.33
BDNFP23560 PABPC1P8-201ENST00000452851 2086 ntBASIC6.73□□□□□ -1.33
BDNFP23560 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
BDNFP23560 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
BDNFP23560 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
BDNFP23560 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
BDNFP23560 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
BDNFP23560 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
BDNFP23560 AL136984.1-201ENST00000607611 1893 ntBASIC6.73□□□□□ -1.33
BDNFP23560 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
BDNFP23560 AC006213.6-201ENST00000623722 4179 ntBASIC6.72□□□□□ -1.33
BDNFP23560 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
BDNFP23560 UGT2B27P-201ENST00000505092 1620 ntBASIC6.72□□□□□ -1.33
BDNFP23560 AC027228.2-201ENST00000567141 2154 ntBASIC6.72□□□□□ -1.33
BDNFP23560 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.72□□□□□ -1.33
BDNFP23560 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms