Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 RBMY1HP-201ENST00000382759 1389 ntBASIC5.3□□□□□ -1.56
CTLA4P16410 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.3□□□□□ -1.56
CTLA4P16410 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
CTLA4P16410 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTLA4P16410 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTLA4P16410 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTLA4P16410 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTLA4P16410 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.3□□□□□ -1.56
CTLA4P16410 SNX18P3-202ENST00000565670 1750 ntBASIC5.3□□□□□ -1.56
CTLA4P16410 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CTLA4P16410 MTCO1P28-201ENST00000574177 1528 ntBASIC5.3□□□□□ -1.56
CTLA4P16410 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTLA4P16410 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.3□□□□□ -1.56
CTLA4P16410 AC108479.1-201ENST00000431142 427 ntBASIC5.3□□□□□ -1.56
CTLA4P16410 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTLA4P16410 AC007383.1-201ENST00000445875 636 ntBASIC5.3□□□□□ -1.56
CTLA4P16410 PPIAP7-201ENST00000454070 489 ntBASIC5.3□□□□□ -1.56
CTLA4P16410 RPL5P12-201ENST00000477071 851 ntBASIC5.3□□□□□ -1.56
CTLA4P16410 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.3□□□□□ -1.56
CTLA4P16410 RN7SL362P-201ENST00000494228 267 ntBASIC5.3□□□□□ -1.56
CTLA4P16410 AC113367.2-201ENST00000505749 160 ntBASIC5.3□□□□□ -1.56
CTLA4P16410 OR7E99P-201ENST00000505750 922 ntBASIC5.3□□□□□ -1.56
CTLA4P16410 AC108103.1-201ENST00000511286 446 ntBASIC5.3□□□□□ -1.56
CTLA4P16410 MAST4-IT1-201ENST00000514241 658 ntBASIC5.3□□□□□ -1.56
CTLA4P16410 snoU109.5-201ENST00000516231 132 ntBASIC5.3□□□□□ -1.56
CTLA4P16410 OR7E158P-201ENST00000524483 910 ntBASIC5.3□□□□□ -1.56
CTLA4P16410 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTLA4P16410 AP000620.1-201ENST00000527147 504 ntBASIC5.3□□□□□ -1.56
CTLA4P16410 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.3□□□□□ -1.56
CTLA4P16410 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.3□□□□□ -1.56
CTLA4P16410 AC007346.1-201ENST00000569208 867 ntBASIC5.3□□□□□ -1.56
CTLA4P16410 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTLA4P16410 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC5.3□□□□□ -1.56
CTLA4P16410 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.3□□□□□ -1.56
CTLA4P16410 OR7A8P-201ENST00000595427 913 ntBASIC5.3□□□□□ -1.56
CTLA4P16410 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.3□□□□□ -1.56
CTLA4P16410 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
CTLA4P16410 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTLA4P16410 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CTLA4P16410 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.3□□□□□ -1.56
CTLA4P16410 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTLA4P16410 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.3□□□□□ -1.56
CTLA4P16410 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
CTLA4P16410 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTLA4P16410 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTLA4P16410 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTLA4P16410 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CTLA4P16410 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTLA4P16410 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTLA4P16410 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
CTLA4P16410 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CTLA4P16410 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTLA4P16410 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CTLA4P16410 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
CTLA4P16410 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.29□□□□□ -1.56
CTLA4P16410 AP001157.1-201ENST00000550837 2339 ntBASIC5.29□□□□□ -1.56
CTLA4P16410 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTLA4P16410 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTLA4P16410 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTLA4P16410 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTLA4P16410 RN7SKP250-201ENST00000363924 321 ntBASIC5.29□□□□□ -1.56
CTLA4P16410 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.29□□□□□ -1.56
CTLA4P16410 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.29□□□□□ -1.56
CTLA4P16410 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.29□□□□□ -1.56
CTLA4P16410 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.29□□□□□ -1.56
CTLA4P16410 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.29□□□□□ -1.56
CTLA4P16410 RPSAP65-201ENST00000429660 595 ntBASIC5.29□□□□□ -1.56
CTLA4P16410 TRIM60P16-201ENST00000444048 694 ntBASIC5.29□□□□□ -1.56
CTLA4P16410 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.29□□□□□ -1.56
CTLA4P16410 snoU13.29-201ENST00000459370 104 ntBASIC5.29□□□□□ -1.56
CTLA4P16410 AL603882.1-201ENST00000463059 681 ntBASIC5.29□□□□□ -1.56
CTLA4P16410 AC115223.1-201ENST00000466377 870 ntBASIC5.29□□□□□ -1.56
CTLA4P16410 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.29□□□□□ -1.56
CTLA4P16410 AC098818.1-201ENST00000478593 252 ntBASIC5.29□□□□□ -1.56
CTLA4P16410 AC044810.1-201ENST00000480271 711 ntBASIC5.29□□□□□ -1.56
CTLA4P16410 RN7SL568P-201ENST00000493069 298 ntBASIC5.29□□□□□ -1.56
CTLA4P16410 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CTLA4P16410 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.29□□□□□ -1.56
CTLA4P16410 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.29□□□□□ -1.56
CTLA4P16410 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.29□□□□□ -1.56
CTLA4P16410 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.29□□□□□ -1.56
CTLA4P16410 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.29□□□□□ -1.56
CTLA4P16410 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.29□□□□□ -1.56
CTLA4P16410 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.29□□□□□ -1.56
CTLA4P16410 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.29□□□□□ -1.56
CTLA4P16410 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.29□□□□□ -1.56
CTLA4P16410 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.29□□□□□ -1.56
CTLA4P16410 RN7SL230P-201ENST00000580835 303 ntBASIC5.29□□□□□ -1.56
CTLA4P16410 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.29□□□□□ -1.56
CTLA4P16410 AC011500.1-201ENST00000601963 469 ntBASIC5.29□□□□□ -1.56
CTLA4P16410 AC073389.3-201ENST00000609434 935 ntBASIC5.29□□□□□ -1.56
CTLA4P16410 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.29□□□□□ -1.56
CTLA4P16410 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.29□□□□□ -1.56
CTLA4P16410 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.29□□□□□ -1.56
CTLA4P16410 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.29□□□□□ -1.56
CTLA4P16410 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CTLA4P16410 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CTLA4P16410 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTLA4P16410 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
CTLA4P16410 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms