Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.97□□□□□ -1.45
HOXC4P09017 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.97□□□□□ -1.45
HOXC4P09017 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC4P09017 HMGA1P8-201ENST00000414130 321 ntBASIC5.97□□□□□ -1.45
HOXC4P09017 PTCD2P2-201ENST00000415579 1095 ntBASIC5.97□□□□□ -1.45
HOXC4P09017 AC007562.1-201ENST00000421819 517 ntBASIC5.97□□□□□ -1.45
HOXC4P09017 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.97□□□□□ -1.45
HOXC4P09017 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.97□□□□□ -1.45
HOXC4P09017 AL389925.1-201ENST00000432257 728 ntBASIC5.97□□□□□ -1.45
HOXC4P09017 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.97□□□□□ -1.45
HOXC4P09017 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.97□□□□□ -1.45
HOXC4P09017 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.97□□□□□ -1.45
HOXC4P09017 AC023274.2-201ENST00000445264 521 ntBASIC5.97□□□□□ -1.45
HOXC4P09017 RAB28P2-201ENST00000454299 641 ntBASIC5.97□□□□□ -1.45
HOXC4P09017 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.97□□□□□ -1.45
HOXC4P09017 RPL23AP40-201ENST00000487630 390 ntBASIC5.97□□□□□ -1.45
HOXC4P09017 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.97□□□□□ -1.45
HOXC4P09017 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.97□□□□□ -1.45
HOXC4P09017 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
HOXC4P09017 OR4H6P-201ENST00000563771 921 ntBASIC5.97□□□□□ -1.45
HOXC4P09017 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.97□□□□□ -1.45
HOXC4P09017 RNU4ATAC-201ENST00000580972 127 ntBASIC5.97□□□□□ -1.45
HOXC4P09017 AC011497.2-201ENST00000600255 639 ntBASIC5.97□□□□□ -1.45
HOXC4P09017 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.97□□□□□ -1.45
HOXC4P09017 AP001962.1-201ENST00000624114 559 ntBASIC5.97□□□□□ -1.45
HOXC4P09017 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
HOXC4P09017 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
HOXC4P09017 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC4P09017 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC4P09017 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC4P09017 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.97□□□□□ -1.45
HOXC4P09017 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC4P09017 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HOXC4P09017 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HOXC4P09017 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
HOXC4P09017 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
HOXC4P09017 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
HOXC4P09017 AC016583.1-201ENST00000624221 2431 ntBASIC5.96□□□□□ -1.45
HOXC4P09017 AL591848.4-201ENST00000567832 3472 ntBASIC5.96□□□□□ -1.45
HOXC4P09017 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.96□□□□□ -1.46
HOXC4P09017 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC4P09017 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC4P09017 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC4P09017 RNA5SP375-201ENST00000362975 119 ntBASIC5.96□□□□□ -1.46
HOXC4P09017 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.96□□□□□ -1.46
HOXC4P09017 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
HOXC4P09017 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.96□□□□□ -1.46
HOXC4P09017 RN7SKP151-201ENST00000410230 316 ntBASIC5.96□□□□□ -1.46
HOXC4P09017 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.96□□□□□ -1.46
HOXC4P09017 KIF4CP-201ENST00000422742 1279 ntBASIC5.96□□□□□ -1.46
HOXC4P09017 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.96□□□□□ -1.46
HOXC4P09017 AC079922.1-201ENST00000443291 359 ntBASIC5.96□□□□□ -1.46
HOXC4P09017 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.96□□□□□ -1.46
HOXC4P09017 ACA64.1-201ENST00000459171 127 ntBASIC5.96□□□□□ -1.46
HOXC4P09017 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.96□□□□□ -1.46
HOXC4P09017 RN7SL352P-201ENST00000466002 277 ntBASIC5.96□□□□□ -1.46
HOXC4P09017 RN7SL269P-201ENST00000467795 305 ntBASIC5.96□□□□□ -1.46
HOXC4P09017 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.96□□□□□ -1.46
HOXC4P09017 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC4P09017 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.96□□□□□ -1.46
HOXC4P09017 UGT2A3P7-201ENST00000510485 734 ntBASIC5.96□□□□□ -1.46
HOXC4P09017 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.96□□□□□ -1.46
HOXC4P09017 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.96□□□□□ -1.46
HOXC4P09017 WBP1LP3-201ENST00000523033 208 ntBASIC5.96□□□□□ -1.46
HOXC4P09017 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.96□□□□□ -1.46
HOXC4P09017 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.96□□□□□ -1.46
HOXC4P09017 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.96□□□□□ -1.46
HOXC4P09017 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.96□□□□□ -1.46
HOXC4P09017 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC4P09017 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC4P09017 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC4P09017 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC4P09017 AC137056.2-201ENST00000624055 1958 ntBASIC5.96□□□□□ -1.46
HOXC4P09017 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
HOXC4P09017 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC4P09017 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC4P09017 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC4P09017 AC027279.1-201ENST00000568885 4284 ntBASIC5.96□□□□□ -1.46
HOXC4P09017 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC4P09017 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC4P09017 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC4P09017 AC027088.4-201ENST00000611559 1947 ntBASIC5.95□□□□□ -1.46
HOXC4P09017 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC4P09017 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC4P09017 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC4P09017 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.95□□□□□ -1.46
HOXC4P09017 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.95□□□□□ -1.46
HOXC4P09017 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC4P09017 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC4P09017 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC4P09017 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC4P09017 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC4P09017 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
HOXC4P09017 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.95□□□□□ -1.46
HOXC4P09017 AP003170.5-201ENST00000397185 335 ntBASIC5.95□□□□□ -1.46
HOXC4P09017 AC016739.1-201ENST00000405359 345 ntBASIC5.95□□□□□ -1.46
HOXC4P09017 MIR1203-201ENST00000408812 85 ntBASIC5.95□□□□□ -1.46
HOXC4P09017 RN7SKP166-201ENST00000410812 305 ntBASIC5.95□□□□□ -1.46
HOXC4P09017 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.95□□□□□ -1.46
HOXC4P09017 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms