Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
RNF40O75150 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC8.76□□□□□ -1.01
RNF40O75150 HSPD1P4-201ENST00000547203 1702 ntBASIC8.76□□□□□ -1.01
RNF40O75150 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC8.76□□□□□ -1.01
RNF40O75150 MELK-207ENST00000536860 2342 ntTSL 2 BASIC8.76□□□□□ -1.01
RNF40O75150 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
RNF40O75150 GUCY2GP-201ENST00000479705 3222 ntBASIC8.76□□□□□ -1.01
RNF40O75150 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
RNF40O75150 AL137918.1-201ENST00000624542 1922 ntBASIC8.76□□□□□ -1.01
RNF40O75150 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC8.76□□□□□ -1.01
RNF40O75150 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC8.76□□□□□ -1.01
RNF40O75150 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
RNF40O75150 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
RNF40O75150 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
RNF40O75150 AC018682.1-201ENST00000506009 1519 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
RNF40O75150 LINC00955-202ENST00000514422 1502 ntTSL 4 BASIC8.75□□□□□ -1.01
RNF40O75150 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
RNF40O75150 CDKL5-209ENST00000635828 3823 ntTSL 5 BASIC8.75□□□□□ -1.01
RNF40O75150 AC104964.2-201ENST00000562242 4641 ntBASIC8.75□□□□□ -1.01
RNF40O75150 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RNF40O75150 IMMT-201ENST00000254636 2613 ntTSL 5 BASIC8.75□□□□□ -1.01
RNF40O75150 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC8.75□□□□□ -1.01
RNF40O75150 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
RNF40O75150 PSG9-209ENST00000621109 2019 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
RNF40O75150 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
RNF40O75150 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
RNF40O75150 USP46-207ENST00000508499 1419 ntTSL 2 BASIC8.75□□□□□ -1.01
RNF40O75150 AC132825.1-201ENST00000463573 2247 ntBASIC8.75□□□□□ -1.01
RNF40O75150 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
RNF40O75150 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
RNF40O75150 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RNF40O75150 RNU4-59P-201ENST00000364447 116 ntBASIC8.75□□□□□ -1.01
RNF40O75150 RNU6-878P-201ENST00000384578 110 ntBASIC8.75□□□□□ -1.01
RNF40O75150 AL136968.2-201ENST00000407959 354 ntBASIC8.75□□□□□ -1.01
RNF40O75150 RPL3P4-201ENST00000417615 423 ntBASIC8.75□□□□□ -1.01
RNF40O75150 CDC42P6-201ENST00000421246 576 ntBASIC8.75□□□□□ -1.01
RNF40O75150 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
RNF40O75150 VOPP1-205ENST00000427700 632 ntTSL 5 BASIC8.75□□□□□ -1.01
RNF40O75150 AC112493.1-202ENST00000436019 673 ntTSL 3 BASIC8.75□□□□□ -1.01
RNF40O75150 AL773572.1-202ENST00000440221 1004 ntTSL 3 BASIC8.75□□□□□ -1.01
RNF40O75150 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC8.75□□□□□ -1.01
RNF40O75150 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC8.75□□□□□ -1.01
RNF40O75150 RN7SL587P-201ENST00000459853 281 ntBASIC8.75□□□□□ -1.01
RNF40O75150 RN7SL135P-201ENST00000490144 278 ntBASIC8.75□□□□□ -1.01
RNF40O75150 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC8.75□□□□□ -1.01
RNF40O75150 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC8.75□□□□□ -1.01
RNF40O75150 GAPDHP31-201ENST00000509325 1014 ntBASIC8.75□□□□□ -1.01
RNF40O75150 AC026782.1-201ENST00000512952 449 ntBASIC8.75□□□□□ -1.01
RNF40O75150 RN7SKP190-201ENST00000516079 286 ntBASIC8.75□□□□□ -1.01
RNF40O75150 RNA5SP287-201ENST00000516358 103 ntBASIC8.75□□□□□ -1.01
RNF40O75150 AC060765.1-202ENST00000518367 257 ntTSL 3 BASIC8.75□□□□□ -1.01
RNF40O75150 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC8.75□□□□□ -1.01
RNF40O75150 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC8.75□□□□□ -1.01
RNF40O75150 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC8.75□□□□□ -1.01
RNF40O75150 JPT1-211ENST00000581874 517 ntTSL 5 BASIC8.75□□□□□ -1.01
RNF40O75150 AC007952.7-201ENST00000583141 757 ntBASIC8.75□□□□□ -1.01
RNF40O75150 VN1R107P-201ENST00000601784 209 ntBASIC8.75□□□□□ -1.01
RNF40O75150 AL121917.2-201ENST00000605044 390 ntBASIC8.75□□□□□ -1.01
RNF40O75150 AC097534.2-201ENST00000609153 751 ntTSL 3 BASIC8.75□□□□□ -1.01
RNF40O75150 MIR6736-201ENST00000616799 59 ntBASIC8.75□□□□□ -1.01
RNF40O75150 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC8.75□□□□□ -1.01
RNF40O75150 AP003400.3-201ENST00000624904 346 ntBASIC8.75□□□□□ -1.01
RNF40O75150 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
RNF40O75150 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
RNF40O75150 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
RNF40O75150 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RNF40O75150 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC8.75□□□□□ -1.01
RNF40O75150 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC8.75□□□□□ -1.01
RNF40O75150 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RNF40O75150 ZNF33BP1-201ENST00000452497 1834 ntBASIC8.75□□□□□ -1.01
RNF40O75150 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
RNF40O75150 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
RNF40O75150 EEF1A1P9-201ENST00000514975 1383 ntBASIC8.74□□□□□ -1.01
RNF40O75150 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
RNF40O75150 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.74□□□□□ -1.01
RNF40O75150 ARMC3-202ENST00000376528 3258 ntTSL 2 BASIC8.74□□□□□ -1.01
RNF40O75150 ZNF562-208ENST00000590155 1712 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
RNF40O75150 PPWD1-215ENST00000538977 2055 ntTSL 2 BASIC8.74□□□□□ -1.01
RNF40O75150 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
RNF40O75150 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.74□□□□□ -1.01
RNF40O75150 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
RNF40O75150 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
RNF40O75150 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RNF40O75150 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC8.74□□□□□ -1.01
RNF40O75150 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
RNF40O75150 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RNF40O75150 AHCYP5-201ENST00000331585 1238 ntBASIC8.74□□□□□ -1.01
RNF40O75150 MIR425-201ENST00000362162 87 ntBASIC8.74□□□□□ -1.01
RNF40O75150 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC8.74□□□□□ -1.01
RNF40O75150 RNU6-1160P-201ENST00000384546 104 ntBASIC8.74□□□□□ -1.01
RNF40O75150 Z97832.1-201ENST00000402490 328 ntBASIC8.74□□□□□ -1.01
RNF40O75150 RAB28P1-201ENST00000411517 641 ntBASIC8.74□□□□□ -1.01
RNF40O75150 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RNF40O75150 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC8.74□□□□□ -1.01
RNF40O75150 AC090044.1-201ENST00000423193 497 ntTSL 2 BASIC8.74□□□□□ -1.01
RNF40O75150 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC8.74□□□□□ -1.01
RNF40O75150 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC8.74□□□□□ -1.01
RNF40O75150 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC8.74□□□□□ -1.01
RNF40O75150 AC239367.2-201ENST00000447309 705 ntBASIC8.74□□□□□ -1.01
RNF40O75150 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC8.74□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 259 ms