Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AP002981.1-201ENST00000517692 975 ntBASIC6.26□□□□□ -1.41
SMAD6O43541 AC130365.2-201ENST00000525882 1201 ntBASIC6.26□□□□□ -1.41
SMAD6O43541 AP005639.1-201ENST00000526939 192 ntBASIC6.26□□□□□ -1.41
SMAD6O43541 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.26□□□□□ -1.41
SMAD6O43541 RPA2P3-201ENST00000533268 770 ntBASIC6.26□□□□□ -1.41
SMAD6O43541 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.26□□□□□ -1.41
SMAD6O43541 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SMAD6O43541 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.26□□□□□ -1.41
SMAD6O43541 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.26□□□□□ -1.41
SMAD6O43541 RNU4ATAC-201ENST00000580972 127 ntBASIC6.26□□□□□ -1.41
SMAD6O43541 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.26□□□□□ -1.41
SMAD6O43541 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.26□□□□□ -1.41
SMAD6O43541 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.26□□□□□ -1.41
SMAD6O43541 AC011497.2-201ENST00000600255 639 ntBASIC6.26□□□□□ -1.41
SMAD6O43541 AC008147.4-201ENST00000617570 1204 ntBASIC6.26□□□□□ -1.41
SMAD6O43541 AL137067.2-201ENST00000621202 131 ntBASIC6.26□□□□□ -1.41
SMAD6O43541 AC020978.9-201ENST00000624380 1141 ntBASIC6.26□□□□□ -1.41
SMAD6O43541 AC080188.3-201ENST00000624842 748 ntBASIC6.26□□□□□ -1.41
SMAD6O43541 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.26□□□□□ -1.41
SMAD6O43541 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SMAD6O43541 HDAC1P2-201ENST00000453661 1398 ntBASIC6.26□□□□□ -1.41
SMAD6O43541 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.26□□□□□ -1.41
SMAD6O43541 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.26□□□□□ -1.41
SMAD6O43541 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SMAD6O43541 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
SMAD6O43541 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
SMAD6O43541 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.26□□□□□ -1.41
SMAD6O43541 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SMAD6O43541 AC034229.2-201ENST00000566945 2508 ntBASIC6.26□□□□□ -1.41
SMAD6O43541 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SMAD6O43541 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SMAD6O43541 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SMAD6O43541 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SMAD6O43541 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.25□□□□□ -1.41
SMAD6O43541 PSG10P-201ENST00000501199 1500 ntBASIC6.25□□□□□ -1.41
SMAD6O43541 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.25□□□□□ -1.41
SMAD6O43541 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SMAD6O43541 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SMAD6O43541 ICE2P1-201ENST00000512800 1849 ntBASIC6.25□□□□□ -1.41
SMAD6O43541 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SMAD6O43541 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.25□□□□□ -1.41
SMAD6O43541 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
SMAD6O43541 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.25□□□□□ -1.41
SMAD6O43541 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SMAD6O43541 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SMAD6O43541 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.25□□□□□ -1.41
SMAD6O43541 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SMAD6O43541 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SMAD6O43541 RN7SKP275-201ENST00000364626 301 ntBASIC6.25□□□□□ -1.41
SMAD6O43541 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.25□□□□□ -1.41
SMAD6O43541 AC004386.1-201ENST00000393214 761 ntBASIC6.25□□□□□ -1.41
SMAD6O43541 AL132875.1-201ENST00000403623 949 ntBASIC6.25□□□□□ -1.41
SMAD6O43541 RNA5SP156-201ENST00000410250 110 ntBASIC6.25□□□□□ -1.41
SMAD6O43541 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.25□□□□□ -1.41
SMAD6O43541 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.25□□□□□ -1.41
SMAD6O43541 AL355355.1-201ENST00000442900 793 ntBASIC6.25□□□□□ -1.41
SMAD6O43541 RPL6P30-201ENST00000443382 862 ntBASIC6.25□□□□□ -1.41
SMAD6O43541 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC6.25□□□□□ -1.41
SMAD6O43541 AC068228.1-201ENST00000461723 211 ntBASIC6.25□□□□□ -1.41
SMAD6O43541 RN7SL221P-201ENST00000466190 281 ntBASIC6.25□□□□□ -1.41
SMAD6O43541 RN7SKP238-201ENST00000516483 249 ntBASIC6.25□□□□□ -1.41
SMAD6O43541 RNA5SP400-201ENST00000517155 111 ntBASIC6.25□□□□□ -1.41
SMAD6O43541 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.25□□□□□ -1.41
SMAD6O43541 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.25□□□□□ -1.41
SMAD6O43541 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.25□□□□□ -1.41
SMAD6O43541 AC079905.1-201ENST00000549280 475 ntBASIC6.25□□□□□ -1.41
SMAD6O43541 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.25□□□□□ -1.41
SMAD6O43541 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.25□□□□□ -1.41
SMAD6O43541 AC018558.5-201ENST00000565840 952 ntBASIC6.25□□□□□ -1.41
SMAD6O43541 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.25□□□□□ -1.41
SMAD6O43541 AC008507.3-201ENST00000585753 472 ntBASIC6.25□□□□□ -1.41
SMAD6O43541 AC079315.1-201ENST00000602952 623 ntBASIC6.25□□□□□ -1.41
SMAD6O43541 RPL12P48-201ENST00000605620 304 ntBASIC6.25□□□□□ -1.41
SMAD6O43541 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.25□□□□□ -1.41
SMAD6O43541 AC073592.7-201ENST00000623659 507 ntBASIC6.25□□□□□ -1.41
SMAD6O43541 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.25□□□□□ -1.41
SMAD6O43541 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
SMAD6O43541 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SMAD6O43541 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SMAD6O43541 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SMAD6O43541 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SMAD6O43541 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.25□□□□□ -1.41
SMAD6O43541 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SMAD6O43541 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.25□□□□□ -1.41
SMAD6O43541 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SMAD6O43541 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SMAD6O43541 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SMAD6O43541 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SMAD6O43541 AC008627.1-201ENST00000517511 1704 ntBASIC6.25□□□□□ -1.41
SMAD6O43541 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SMAD6O43541 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SMAD6O43541 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SMAD6O43541 AC010168.2-201ENST00000562691 5428 ntBASIC6.24□□□□□ -1.41
SMAD6O43541 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SMAD6O43541 OLMALINC-203ENST00000641087 3779 ntBASIC6.24□□□□□ -1.41
SMAD6O43541 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SMAD6O43541 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SMAD6O43541 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SMAD6O43541 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.24□□□□□ -1.41
SMAD6O43541 ZNF736P10Y-201ENST00000403990 1110 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms