Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CUX2O14529 AC138915.4-201ENST00000565549 4147 ntBASIC10.29□□□□□ -0.76
CUX2O14529 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CUX2O14529 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CUX2O14529 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
CUX2O14529 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
CUX2O14529 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
CUX2O14529 AFP-201ENST00000226359 1914 ntTSL 5 BASIC10.29□□□□□ -0.76
CUX2O14529 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
CUX2O14529 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC10.29□□□□□ -0.76
CUX2O14529 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
CUX2O14529 SNORA43.1-201ENST00000364863 140 ntBASIC10.29□□□□□ -0.76
CUX2O14529 SNORA62-201ENST00000365493 153 ntBASIC10.29□□□□□ -0.76
CUX2O14529 RNA5SP87-201ENST00000384155 118 ntBASIC10.29□□□□□ -0.76
CUX2O14529 RPS4XP9-201ENST00000405151 780 ntBASIC10.29□□□□□ -0.76
CUX2O14529 AC016712.1-201ENST00000431088 378 ntBASIC10.29□□□□□ -0.76
CUX2O14529 RPL7L1P9-201ENST00000431298 745 ntBASIC10.29□□□□□ -0.76
CUX2O14529 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC10.29□□□□□ -0.76
CUX2O14529 PRPF38AP2-201ENST00000438179 851 ntBASIC10.29□□□□□ -0.76
CUX2O14529 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC10.29□□□□□ -0.76
CUX2O14529 AC093166.4-201ENST00000457867 318 ntBASIC10.29□□□□□ -0.76
CUX2O14529 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CUX2O14529 HMGB1P42-201ENST00000532126 553 ntBASIC10.29□□□□□ -0.76
CUX2O14529 DERA-209ENST00000532964 854 ntTSL 5 BASIC10.29□□□□□ -0.76
CUX2O14529 TOMM20P2-201ENST00000540082 421 ntBASIC10.29□□□□□ -0.76
CUX2O14529 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC10.29□□□□□ -0.76
CUX2O14529 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC10.29□□□□□ -0.76
CUX2O14529 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC10.29□□□□□ -0.76
CUX2O14529 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC10.29□□□□□ -0.76
CUX2O14529 AC008745.1-201ENST00000604064 271 ntBASIC10.29□□□□□ -0.76
CUX2O14529 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CUX2O14529 AP002799.1-201ENST00000623552 423 ntBASIC10.29□□□□□ -0.76
CUX2O14529 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
CUX2O14529 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
CUX2O14529 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC10.28□□□□□ -0.76
CUX2O14529 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
CUX2O14529 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CUX2O14529 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CUX2O14529 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
CUX2O14529 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
CUX2O14529 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CUX2O14529 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CUX2O14529 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC10.28□□□□□ -0.76
CUX2O14529 LARS-212ENST00000510191 3737 ntTSL 2 BASIC10.28□□□□□ -0.76
CUX2O14529 AC126755.2-208ENST00000327792 462 ntBASIC10.28□□□□□ -0.76
CUX2O14529 AC138969.1-213ENST00000331436 462 ntBASIC10.28□□□□□ -0.76
CUX2O14529 RNU1-32P-201ENST00000363937 159 ntBASIC10.28□□□□□ -0.76
CUX2O14529 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CUX2O14529 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC10.28□□□□□ -0.76
CUX2O14529 OR5M12P-201ENST00000423388 929 ntBASIC10.28□□□□□ -0.76
CUX2O14529 AC239367.2-201ENST00000447309 705 ntBASIC10.28□□□□□ -0.76
CUX2O14529 AC234781.3-201ENST00000452540 973 ntBASIC10.28□□□□□ -0.76
CUX2O14529 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC10.28□□□□□ -0.76
CUX2O14529 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC10.28□□□□□ -0.76
CUX2O14529 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC10.28□□□□□ -0.76
CUX2O14529 AC096861.1-201ENST00000616652 240 ntBASIC10.28□□□□□ -0.76
CUX2O14529 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC10.28□□□□□ -0.76
CUX2O14529 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CUX2O14529 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC10.28□□□□□ -0.76
CUX2O14529 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
CUX2O14529 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
CUX2O14529 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
CUX2O14529 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC10.27□□□□□ -0.76
CUX2O14529 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
CUX2O14529 AP000866.6-201ENST00000638898 3579 ntBASIC10.27□□□□□ -0.77
CUX2O14529 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CUX2O14529 ING3-204ENST00000431467 1447 ntTSL 2 BASIC10.27□□□□□ -0.77
CUX2O14529 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CUX2O14529 RPL36P18-201ENST00000419316 318 ntBASIC10.27□□□□□ -0.77
CUX2O14529 RPS26P41-201ENST00000450370 284 ntBASIC10.27□□□□□ -0.77
CUX2O14529 AC016027.4-201ENST00000450866 277 ntBASIC10.27□□□□□ -0.77
CUX2O14529 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC10.27□□□□□ -0.77
CUX2O14529 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC10.27□□□□□ -0.77
CUX2O14529 C1GALT1P3-201ENST00000522049 819 ntBASIC10.27□□□□□ -0.77
CUX2O14529 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC10.27□□□□□ -0.77
CUX2O14529 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CUX2O14529 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CUX2O14529 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
CUX2O14529 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CUX2O14529 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC10.26□□□□□ -0.77
CUX2O14529 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
CUX2O14529 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CUX2O14529 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC10.26□□□□□ -0.77
CUX2O14529 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CUX2O14529 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
CUX2O14529 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC10.26□□□□□ -0.77
CUX2O14529 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
CUX2O14529 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CUX2O14529 AC005294.1-201ENST00000355509 281 ntBASIC10.26□□□□□ -0.77
CUX2O14529 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC10.26□□□□□ -0.77
CUX2O14529 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC10.26□□□□□ -0.77
CUX2O14529 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC10.26□□□□□ -0.77
CUX2O14529 AC005297.1-201ENST00000444765 862 ntBASIC10.26□□□□□ -0.77
CUX2O14529 RPS3AP41-201ENST00000462701 778 ntBASIC10.26□□□□□ -0.77
CUX2O14529 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC10.26□□□□□ -0.77
CUX2O14529 AC092865.1-201ENST00000544395 1023 ntBASIC10.26□□□□□ -0.77
CUX2O14529 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC10.26□□□□□ -0.77
CUX2O14529 AC087783.2-201ENST00000605070 562 ntBASIC10.26□□□□□ -0.77
CUX2O14529 AL021918.2-201ENST00000613415 194 ntBASIC10.26□□□□□ -0.77
CUX2O14529 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms