Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AL133480.2-201ENST00000456723 487 ntBASIC7.76□□□□□ -1.17
CNTN3Q9P232 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC7.76□□□□□ -1.17
CNTN3Q9P232 AC079193.1-201ENST00000460497 588 ntBASIC7.76□□□□□ -1.17
CNTN3Q9P232 AC026348.1-201ENST00000462549 1053 ntBASIC7.76□□□□□ -1.17
CNTN3Q9P232 AC084754.1-201ENST00000463466 464 ntBASIC7.76□□□□□ -1.17
CNTN3Q9P232 AC066616.1-201ENST00000486795 413 ntBASIC7.76□□□□□ -1.17
CNTN3Q9P232 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC7.76□□□□□ -1.17
CNTN3Q9P232 AC017007.1-201ENST00000511960 415 ntBASIC7.76□□□□□ -1.17
CNTN3Q9P232 RNA5SP96-201ENST00000516041 107 ntBASIC7.76□□□□□ -1.17
CNTN3Q9P232 OXR1-212ENST00000521592 993 ntTSL 5 BASIC7.76□□□□□ -1.17
CNTN3Q9P232 OR5G4P-201ENST00000525251 760 ntBASIC7.76□□□□□ -1.17
CNTN3Q9P232 GTF2IP11-201ENST00000526931 420 ntBASIC7.76□□□□□ -1.17
CNTN3Q9P232 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CNTN3Q9P232 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.76□□□□□ -1.17
CNTN3Q9P232 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC7.76□□□□□ -1.17
CNTN3Q9P232 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CNTN3Q9P232 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC7.76□□□□□ -1.17
CNTN3Q9P232 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.76□□□□□ -1.17
CNTN3Q9P232 BLZF2P-201ENST00000553776 1130 ntBASIC7.76□□□□□ -1.17
CNTN3Q9P232 AC013283.1-201ENST00000557282 492 ntBASIC7.76□□□□□ -1.17
CNTN3Q9P232 AC006362.1-201ENST00000567392 174 ntBASIC7.76□□□□□ -1.17
CNTN3Q9P232 MIR3915-201ENST00000578518 97 ntBASIC7.76□□□□□ -1.17
CNTN3Q9P232 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC7.76□□□□□ -1.17
CNTN3Q9P232 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.76□□□□□ -1.17
CNTN3Q9P232 AC109347.2-201ENST00000610220 349 ntBASIC7.76□□□□□ -1.17
CNTN3Q9P232 PTCHD3P1-201ENST00000612350 537 ntBASIC7.76□□□□□ -1.17
CNTN3Q9P232 AC087241.4-201ENST00000612441 480 ntBASIC7.76□□□□□ -1.17
CNTN3Q9P232 MIR6883-201ENST00000614952 78 ntBASIC7.76□□□□□ -1.17
CNTN3Q9P232 AC121761.2-201ENST00000617300 689 ntBASIC7.76□□□□□ -1.17
CNTN3Q9P232 AC012629.3-201ENST00000623397 328 ntBASIC7.76□□□□□ -1.17
CNTN3Q9P232 AC087894.3-201ENST00000623682 349 ntBASIC7.76□□□□□ -1.17
CNTN3Q9P232 AL008636.1-201ENST00000625038 1018 ntBASIC7.76□□□□□ -1.17
CNTN3Q9P232 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC7.76□□□□□ -1.17
CNTN3Q9P232 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CNTN3Q9P232 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.76□□□□□ -1.17
CNTN3Q9P232 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC7.76□□□□□ -1.17
CNTN3Q9P232 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CNTN3Q9P232 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.76□□□□□ -1.17
CNTN3Q9P232 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
CNTN3Q9P232 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CNTN3Q9P232 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CNTN3Q9P232 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CNTN3Q9P232 COL6A4P1-202ENST00000487147 4317 ntBASIC7.76□□□□□ -1.17
CNTN3Q9P232 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CNTN3Q9P232 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CNTN3Q9P232 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
CNTN3Q9P232 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CNTN3Q9P232 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CNTN3Q9P232 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CNTN3Q9P232 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.75□□□□□ -1.17
CNTN3Q9P232 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CNTN3Q9P232 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CNTN3Q9P232 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CNTN3Q9P232 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CNTN3Q9P232 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.75□□□□□ -1.17
CNTN3Q9P232 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
CNTN3Q9P232 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CNTN3Q9P232 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC7.75□□□□□ -1.17
CNTN3Q9P232 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CNTN3Q9P232 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CNTN3Q9P232 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CNTN3Q9P232 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CNTN3Q9P232 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CNTN3Q9P232 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
CNTN3Q9P232 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
CNTN3Q9P232 Y_RNA.6-201ENST00000362350 114 ntBASIC7.75□□□□□ -1.17
CNTN3Q9P232 RNA5SP472-201ENST00000363868 119 ntBASIC7.75□□□□□ -1.17
CNTN3Q9P232 RN7SKP107-201ENST00000364157 290 ntBASIC7.75□□□□□ -1.17
CNTN3Q9P232 RNU6-867P-201ENST00000364956 107 ntBASIC7.75□□□□□ -1.17
CNTN3Q9P232 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC7.75□□□□□ -1.17
CNTN3Q9P232 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC7.75□□□□□ -1.17
CNTN3Q9P232 RNU6-157P-201ENST00000383957 107 ntBASIC7.75□□□□□ -1.17
CNTN3Q9P232 MRPL32P1-201ENST00000406301 247 ntBASIC7.75□□□□□ -1.17
CNTN3Q9P232 RN7SKP166-201ENST00000410812 305 ntBASIC7.75□□□□□ -1.17
CNTN3Q9P232 VDAC1P10-201ENST00000416715 891 ntBASIC7.75□□□□□ -1.17
CNTN3Q9P232 BTF3P9-201ENST00000418784 283 ntBASIC7.75□□□□□ -1.17
CNTN3Q9P232 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.75□□□□□ -1.17
CNTN3Q9P232 AC114755.4-201ENST00000439114 443 ntBASIC7.75□□□□□ -1.17
CNTN3Q9P232 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC7.75□□□□□ -1.17
CNTN3Q9P232 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CNTN3Q9P232 AC007327.1-201ENST00000447461 264 ntBASIC7.75□□□□□ -1.17
CNTN3Q9P232 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC7.75□□□□□ -1.17
CNTN3Q9P232 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.75□□□□□ -1.17
CNTN3Q9P232 AURKAPS1-201ENST00000451805 1212 ntBASIC7.75□□□□□ -1.17
CNTN3Q9P232 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.75□□□□□ -1.17
CNTN3Q9P232 RN7SL325P-201ENST00000460434 283 ntBASIC7.75□□□□□ -1.17
CNTN3Q9P232 RPS7P7-201ENST00000463499 571 ntBASIC7.75□□□□□ -1.17
CNTN3Q9P232 AC104685.1-201ENST00000502445 371 ntBASIC7.75□□□□□ -1.17
CNTN3Q9P232 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC7.75□□□□□ -1.17
CNTN3Q9P232 AK6-204ENST00000512561 587 ntTSL 5 BASIC7.75□□□□□ -1.17
CNTN3Q9P232 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CNTN3Q9P232 HIGD1AP18-201ENST00000520730 278 ntBASIC7.75□□□□□ -1.17
CNTN3Q9P232 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC7.75□□□□□ -1.17
CNTN3Q9P232 OR5M6P-201ENST00000530227 937 ntBASIC7.75□□□□□ -1.17
CNTN3Q9P232 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC7.75□□□□□ -1.17
CNTN3Q9P232 SAA3P-201ENST00000533267 365 ntBASIC7.75□□□□□ -1.17
CNTN3Q9P232 AL121766.1-201ENST00000547436 487 ntBASIC7.75□□□□□ -1.17
CNTN3Q9P232 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC7.75□□□□□ -1.17
CNTN3Q9P232 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CNTN3Q9P232 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms